Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC949928720;28721;28722 chr2:178709824;178709823;178709822chr2:179574551;179574550;179574549
N2AB918227769;27770;27771 chr2:178709824;178709823;178709822chr2:179574551;179574550;179574549
N2A825524988;24989;24990 chr2:178709824;178709823;178709822chr2:179574551;179574550;179574549
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTC
  • RefSeq wild type template codon: GAG
  • Domain: Ig-81
  • Domain position: 7
  • Structural Position: 8
  • Q(SASA): 0.6867
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs1060500573 None 0.998 None 0.492 0.265 0.396794106654 gnomAD-3.1.2 6.57E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/F rs1060500573 None 0.998 None 0.492 0.265 0.396794106654 gnomAD-4.0.0 3.10111E-06 None None None None I None 0 0 None 0 0 None 0 0 1.69604E-06 2.19833E-05 1.60236E-05
L/P None None 0.031 None 0.352 0.175 0.586326688876 gnomAD-4.0.0 1.20032E-06 None None None None I None 0 0 None 0 0 None 0 0 1.3125E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.8245 likely_pathogenic 0.9027 pathogenic -1.987 Destabilizing 0.97 D 0.521 neutral None None None None I
L/C 0.8955 likely_pathogenic 0.9446 pathogenic -1.435 Destabilizing 1.0 D 0.575 neutral None None None None I
L/D 0.9899 likely_pathogenic 0.9973 pathogenic -0.799 Destabilizing 0.996 D 0.607 neutral None None None None I
L/E 0.9675 likely_pathogenic 0.9905 pathogenic -0.697 Destabilizing 0.996 D 0.56 neutral None None None None I
L/F 0.4287 ambiguous 0.6436 pathogenic -1.206 Destabilizing 0.998 D 0.492 neutral None None None None I
L/G 0.9543 likely_pathogenic 0.982 pathogenic -2.419 Highly Destabilizing 0.996 D 0.533 neutral None None None None I
L/H 0.9266 likely_pathogenic 0.9804 pathogenic -1.537 Destabilizing 1.0 D 0.626 neutral None None None None I
L/I 0.1707 likely_benign 0.2331 benign -0.821 Destabilizing 0.993 D 0.489 neutral None None None None I
L/K 0.957 likely_pathogenic 0.9879 pathogenic -1.222 Destabilizing 0.996 D 0.515 neutral None None None None I
L/M 0.2572 likely_benign 0.369 ambiguous -0.778 Destabilizing 0.999 D 0.512 neutral None None None None I
L/N 0.9502 likely_pathogenic 0.985 pathogenic -1.158 Destabilizing 0.999 D 0.619 neutral None None None None I
L/P 0.4267 ambiguous 0.655 pathogenic -1.181 Destabilizing 0.031 N 0.352 neutral None None None None I
L/Q 0.8926 likely_pathogenic 0.9693 pathogenic -1.169 Destabilizing 0.999 D 0.617 neutral None None None None I
L/R 0.9296 likely_pathogenic 0.9788 pathogenic -0.834 Destabilizing 0.998 D 0.621 neutral None None None None I
L/S 0.9457 likely_pathogenic 0.9839 pathogenic -2.024 Highly Destabilizing 0.996 D 0.509 neutral None None None None I
L/T 0.8559 likely_pathogenic 0.939 pathogenic -1.775 Destabilizing 0.985 D 0.535 neutral None None None None I
L/V 0.2371 likely_benign 0.3467 ambiguous -1.181 Destabilizing 0.98 D 0.497 neutral None None None None I
L/W 0.8503 likely_pathogenic 0.9546 pathogenic -1.27 Destabilizing 1.0 D 0.699 prob.neutral None None None None I
L/Y 0.9076 likely_pathogenic 0.973 pathogenic -1.048 Destabilizing 0.999 D 0.571 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.