Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 950 | 3073;3074;3075 | chr2:178783058;178783057;178783056 | chr2:179647785;179647784;179647783 |
N2AB | 950 | 3073;3074;3075 | chr2:178783058;178783057;178783056 | chr2:179647785;179647784;179647783 |
N2A | 950 | 3073;3074;3075 | chr2:178783058;178783057;178783056 | chr2:179647785;179647784;179647783 |
N2B | 904 | 2935;2936;2937 | chr2:178783058;178783057;178783056 | chr2:179647785;179647784;179647783 |
Novex-1 | 904 | 2935;2936;2937 | chr2:178783058;178783057;178783056 | chr2:179647785;179647784;179647783 |
Novex-2 | 904 | 2935;2936;2937 | chr2:178783058;178783057;178783056 | chr2:179647785;179647784;179647783 |
Novex-3 | 950 | 3073;3074;3075 | chr2:178783058;178783057;178783056 | chr2:179647785;179647784;179647783 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs367559160 | 0.185 | 0.996 | N | 0.566 | 0.554 | None | gnomAD-2.1.1 | 2.49E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 5.44E-05 | 0 |
K/E | rs367559160 | 0.185 | 0.996 | N | 0.566 | 0.554 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
K/E | rs367559160 | 0.185 | 0.996 | N | 0.566 | 0.554 | None | gnomAD-4.0.0 | 7.68285E-05 | None | None | None | None | I | None | 2.66973E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.02543E-04 | 0 | 1.60046E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6989 | likely_pathogenic | 0.7791 | pathogenic | 0.012 | Stabilizing | 0.998 | D | 0.583 | neutral | None | None | None | None | I |
K/C | 0.9204 | likely_pathogenic | 0.9448 | pathogenic | -0.16 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
K/D | 0.848 | likely_pathogenic | 0.904 | pathogenic | 0.022 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
K/E | 0.3024 | likely_benign | 0.4058 | ambiguous | 0.035 | Stabilizing | 0.996 | D | 0.566 | neutral | N | 0.469206115 | None | None | I |
K/F | 0.9729 | likely_pathogenic | 0.9834 | pathogenic | -0.131 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
K/G | 0.7751 | likely_pathogenic | 0.8417 | pathogenic | -0.202 | Destabilizing | 1.0 | D | 0.537 | neutral | None | None | None | None | I |
K/H | 0.541 | ambiguous | 0.6062 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
K/I | 0.7984 | likely_pathogenic | 0.8565 | pathogenic | 0.503 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.519784907 | None | None | I |
K/L | 0.7381 | likely_pathogenic | 0.8102 | pathogenic | 0.503 | Stabilizing | 1.0 | D | 0.537 | neutral | None | None | None | None | I |
K/M | 0.6064 | likely_pathogenic | 0.7088 | pathogenic | 0.229 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
K/N | 0.6815 | likely_pathogenic | 0.7708 | pathogenic | 0.243 | Stabilizing | 0.999 | D | 0.693 | prob.neutral | N | 0.514020567 | None | None | I |
K/P | 0.936 | likely_pathogenic | 0.9627 | pathogenic | 0.367 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
K/Q | 0.182 | likely_benign | 0.2145 | benign | 0.08 | Stabilizing | 0.999 | D | 0.685 | prob.neutral | N | 0.437186345 | None | None | I |
K/R | 0.1095 | likely_benign | 0.1148 | benign | -0.057 | Destabilizing | 0.64 | D | 0.266 | neutral | N | 0.455562619 | None | None | I |
K/S | 0.672 | likely_pathogenic | 0.757 | pathogenic | -0.223 | Destabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | I |
K/T | 0.4302 | ambiguous | 0.5159 | ambiguous | -0.06 | Destabilizing | 0.999 | D | 0.66 | neutral | N | 0.50296553 | None | None | I |
K/V | 0.7452 | likely_pathogenic | 0.8093 | pathogenic | 0.367 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
K/W | 0.9518 | likely_pathogenic | 0.9693 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
K/Y | 0.9154 | likely_pathogenic | 0.9463 | pathogenic | 0.195 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.