Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9501 | 28726;28727;28728 | chr2:178709818;178709817;178709816 | chr2:179574545;179574544;179574543 |
N2AB | 9184 | 27775;27776;27777 | chr2:178709818;178709817;178709816 | chr2:179574545;179574544;179574543 |
N2A | 8257 | 24994;24995;24996 | chr2:178709818;178709817;178709816 | chr2:179574545;179574544;179574543 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.996 | None | 0.445 | 0.125 | 0.204665344411 | gnomAD-4.0.0 | 6.84502E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99609E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3869 | ambiguous | 0.2889 | benign | -0.019 | Destabilizing | 0.992 | D | 0.541 | neutral | None | None | None | None | N |
E/C | 0.9803 | likely_pathogenic | 0.9643 | pathogenic | 0.299 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/D | 0.1786 | likely_benign | 0.1165 | benign | -0.088 | Destabilizing | 0.996 | D | 0.445 | neutral | None | None | None | None | N |
E/F | 0.9599 | likely_pathogenic | 0.927 | pathogenic | -0.177 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/G | 0.3519 | ambiguous | 0.2545 | benign | -0.126 | Destabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | N |
E/H | 0.8457 | likely_pathogenic | 0.7455 | pathogenic | 0.101 | Stabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
E/I | 0.821 | likely_pathogenic | 0.7247 | pathogenic | 0.203 | Stabilizing | 0.998 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/K | 0.404 | ambiguous | 0.29 | benign | 0.737 | Stabilizing | 0.992 | D | 0.521 | neutral | None | None | None | None | N |
E/L | 0.8098 | likely_pathogenic | 0.7186 | pathogenic | 0.203 | Stabilizing | 0.998 | D | 0.62 | neutral | None | None | None | None | N |
E/M | 0.8365 | likely_pathogenic | 0.7564 | pathogenic | 0.261 | Stabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
E/N | 0.5169 | ambiguous | 0.3672 | ambiguous | 0.56 | Stabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
E/P | 0.7721 | likely_pathogenic | 0.6318 | pathogenic | 0.147 | Stabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/Q | 0.3637 | ambiguous | 0.2848 | benign | 0.57 | Stabilizing | 1.0 | D | 0.573 | neutral | None | None | None | None | N |
E/R | 0.6232 | likely_pathogenic | 0.4992 | ambiguous | 0.705 | Stabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
E/S | 0.4428 | ambiguous | 0.3213 | benign | 0.446 | Stabilizing | 0.988 | D | 0.513 | neutral | None | None | None | None | N |
E/T | 0.5412 | ambiguous | 0.419 | ambiguous | 0.544 | Stabilizing | 0.683 | D | 0.317 | neutral | None | None | None | None | N |
E/V | 0.5974 | likely_pathogenic | 0.4858 | ambiguous | 0.147 | Stabilizing | 0.998 | D | 0.557 | neutral | None | None | None | None | N |
E/W | 0.9876 | likely_pathogenic | 0.9732 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/Y | 0.9245 | likely_pathogenic | 0.8616 | pathogenic | 0.04 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.