Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9507 | 28744;28745;28746 | chr2:178709800;178709799;178709798 | chr2:179574527;179574526;179574525 |
N2AB | 9190 | 27793;27794;27795 | chr2:178709800;178709799;178709798 | chr2:179574527;179574526;179574525 |
N2A | 8263 | 25012;25013;25014 | chr2:178709800;178709799;178709798 | chr2:179574527;179574526;179574525 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.984 | None | 0.449 | 0.304 | 0.28058544554 | gnomAD-4.0.0 | 2.05297E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6984E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1235 | likely_benign | 0.1165 | benign | -0.553 | Destabilizing | 0.103 | N | 0.29 | neutral | None | None | None | None | I |
E/C | 0.9087 | likely_pathogenic | 0.8909 | pathogenic | 0.027 | Stabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | I |
E/D | 0.3116 | likely_benign | 0.2522 | benign | -0.597 | Destabilizing | 0.026 | N | 0.283 | neutral | None | None | None | None | I |
E/F | 0.8323 | likely_pathogenic | 0.7893 | pathogenic | -0.55 | Destabilizing | 0.988 | D | 0.613 | neutral | None | None | None | None | I |
E/G | 0.256 | likely_benign | 0.2065 | benign | -0.786 | Destabilizing | 0.896 | D | 0.545 | neutral | None | None | None | None | I |
E/H | 0.6541 | likely_pathogenic | 0.5891 | pathogenic | -0.619 | Destabilizing | 0.999 | D | 0.383 | neutral | None | None | None | None | I |
E/I | 0.3625 | ambiguous | 0.3237 | benign | 0.038 | Stabilizing | 0.952 | D | 0.532 | neutral | None | None | None | None | I |
E/K | 0.1447 | likely_benign | 0.1223 | benign | 0.076 | Stabilizing | 0.896 | D | 0.49 | neutral | None | None | None | None | I |
E/L | 0.4465 | ambiguous | 0.3984 | ambiguous | 0.038 | Stabilizing | 0.851 | D | 0.563 | neutral | None | None | None | None | I |
E/M | 0.4867 | ambiguous | 0.4492 | ambiguous | 0.381 | Stabilizing | 0.997 | D | 0.571 | neutral | None | None | None | None | I |
E/N | 0.436 | ambiguous | 0.3628 | ambiguous | -0.157 | Destabilizing | 0.952 | D | 0.421 | neutral | None | None | None | None | I |
E/P | 0.6823 | likely_pathogenic | 0.6246 | pathogenic | -0.138 | Destabilizing | 0.988 | D | 0.479 | neutral | None | None | None | None | I |
E/Q | 0.1706 | likely_benign | 0.1515 | benign | -0.133 | Destabilizing | 0.984 | D | 0.449 | neutral | None | None | None | None | I |
E/R | 0.2774 | likely_benign | 0.2333 | benign | 0.196 | Stabilizing | 0.988 | D | 0.415 | neutral | None | None | None | None | I |
E/S | 0.2632 | likely_benign | 0.2225 | benign | -0.358 | Destabilizing | 0.851 | D | 0.453 | neutral | None | None | None | None | I |
E/T | 0.2918 | likely_benign | 0.247 | benign | -0.176 | Destabilizing | 0.919 | D | 0.525 | neutral | None | None | None | None | I |
E/V | 0.206 | likely_benign | 0.1871 | benign | -0.138 | Destabilizing | 0.211 | N | 0.374 | neutral | None | None | None | None | I |
E/W | 0.9471 | likely_pathogenic | 0.9264 | pathogenic | -0.428 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/Y | 0.7523 | likely_pathogenic | 0.6945 | pathogenic | -0.316 | Destabilizing | 0.996 | D | 0.579 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.