Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9511 | 28756;28757;28758 | chr2:178709788;178709787;178709786 | chr2:179574515;179574514;179574513 |
N2AB | 9194 | 27805;27806;27807 | chr2:178709788;178709787;178709786 | chr2:179574515;179574514;179574513 |
N2A | 8267 | 25024;25025;25026 | chr2:178709788;178709787;178709786 | chr2:179574515;179574514;179574513 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.002 | None | 0.227 | 0.138 | 0.0986583533028 | gnomAD-4.0.0 | 1.59145E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.927 | likely_pathogenic | 0.9008 | pathogenic | -2.976 | Highly Destabilizing | 0.013 | N | 0.457 | neutral | None | None | None | None | N |
F/C | 0.638 | likely_pathogenic | 0.5633 | ambiguous | -2.403 | Highly Destabilizing | 0.975 | D | 0.691 | prob.neutral | None | None | None | None | N |
F/D | 0.9974 | likely_pathogenic | 0.9972 | pathogenic | -3.462 | Highly Destabilizing | 0.944 | D | 0.755 | deleterious | None | None | None | None | N |
F/E | 0.9956 | likely_pathogenic | 0.9955 | pathogenic | -3.235 | Highly Destabilizing | 0.828 | D | 0.743 | deleterious | None | None | None | None | N |
F/G | 0.983 | likely_pathogenic | 0.9789 | pathogenic | -3.456 | Highly Destabilizing | 0.704 | D | 0.691 | prob.neutral | None | None | None | None | N |
F/H | 0.969 | likely_pathogenic | 0.9683 | pathogenic | -2.07 | Highly Destabilizing | 0.995 | D | 0.697 | prob.neutral | None | None | None | None | N |
F/I | 0.3349 | likely_benign | 0.2938 | benign | -1.406 | Destabilizing | 0.27 | N | 0.493 | neutral | None | None | None | None | N |
F/K | 0.9937 | likely_pathogenic | 0.9937 | pathogenic | -2.597 | Highly Destabilizing | 0.828 | D | 0.721 | prob.delet. | None | None | None | None | N |
F/L | 0.8082 | likely_pathogenic | 0.7687 | pathogenic | -1.406 | Destabilizing | 0.002 | N | 0.227 | neutral | None | None | None | None | N |
F/M | 0.7002 | likely_pathogenic | 0.6622 | pathogenic | -1.275 | Destabilizing | 0.893 | D | 0.684 | prob.neutral | None | None | None | None | N |
F/N | 0.989 | likely_pathogenic | 0.9891 | pathogenic | -3.132 | Highly Destabilizing | 0.981 | D | 0.749 | deleterious | None | None | None | None | N |
F/P | 0.9985 | likely_pathogenic | 0.9982 | pathogenic | -1.943 | Destabilizing | 0.944 | D | 0.743 | deleterious | None | None | None | None | N |
F/Q | 0.9891 | likely_pathogenic | 0.9886 | pathogenic | -3.023 | Highly Destabilizing | 0.981 | D | 0.75 | deleterious | None | None | None | None | N |
F/R | 0.9823 | likely_pathogenic | 0.9811 | pathogenic | -2.143 | Highly Destabilizing | 0.944 | D | 0.744 | deleterious | None | None | None | None | N |
F/S | 0.9599 | likely_pathogenic | 0.9494 | pathogenic | -3.799 | Highly Destabilizing | 0.473 | N | 0.655 | neutral | None | None | None | None | N |
F/T | 0.9345 | likely_pathogenic | 0.9203 | pathogenic | -3.445 | Highly Destabilizing | 0.704 | D | 0.637 | neutral | None | None | None | None | N |
F/V | 0.3366 | likely_benign | 0.2868 | benign | -1.943 | Destabilizing | 0.01 | N | 0.388 | neutral | None | None | None | None | N |
F/W | 0.8486 | likely_pathogenic | 0.8257 | pathogenic | -0.505 | Destabilizing | 0.995 | D | 0.613 | neutral | None | None | None | None | N |
F/Y | 0.5424 | ambiguous | 0.5225 | ambiguous | -0.952 | Destabilizing | 0.784 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.