Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9512 | 28759;28760;28761 | chr2:178709785;178709784;178709783 | chr2:179574512;179574511;179574510 |
N2AB | 9195 | 27808;27809;27810 | chr2:178709785;178709784;178709783 | chr2:179574512;179574511;179574510 |
N2A | 8268 | 25027;25028;25029 | chr2:178709785;178709784;178709783 | chr2:179574512;179574511;179574510 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.201 | None | 0.603 | 0.144 | 0.171388866994 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3462 | ambiguous | 0.2589 | benign | -0.248 | Destabilizing | 0.399 | N | 0.578 | neutral | None | None | None | None | N |
K/C | 0.5443 | ambiguous | 0.4685 | ambiguous | -0.563 | Destabilizing | 0.982 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/D | 0.7148 | likely_pathogenic | 0.6083 | pathogenic | -0.003 | Destabilizing | 0.002 | N | 0.441 | neutral | None | None | None | None | N |
K/E | 0.2223 | likely_benign | 0.1731 | benign | 0.092 | Stabilizing | 0.201 | N | 0.603 | neutral | None | None | None | None | N |
K/F | 0.6083 | likely_pathogenic | 0.5 | ambiguous | -0.007 | Destabilizing | 0.826 | D | 0.692 | prob.neutral | None | None | None | None | N |
K/G | 0.5441 | ambiguous | 0.3983 | ambiguous | -0.572 | Destabilizing | 0.399 | N | 0.609 | neutral | None | None | None | None | N |
K/H | 0.2168 | likely_benign | 0.1856 | benign | -0.754 | Destabilizing | 0.947 | D | 0.672 | neutral | None | None | None | None | N |
K/I | 0.202 | likely_benign | 0.1653 | benign | 0.565 | Stabilizing | 0.781 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/L | 0.2391 | likely_benign | 0.188 | benign | 0.565 | Stabilizing | 0.7 | D | 0.641 | neutral | None | None | None | None | N |
K/M | 0.165 | likely_benign | 0.1434 | benign | 0.141 | Stabilizing | 0.982 | D | 0.662 | neutral | None | None | None | None | N |
K/N | 0.457 | ambiguous | 0.3485 | ambiguous | -0.363 | Destabilizing | 0.638 | D | 0.612 | neutral | None | None | None | None | N |
K/P | 0.9131 | likely_pathogenic | 0.8361 | pathogenic | 0.324 | Stabilizing | 0.826 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/Q | 0.1055 | likely_benign | 0.0917 | benign | -0.385 | Destabilizing | 0.468 | N | 0.645 | neutral | None | None | None | None | N |
K/R | 0.0704 | likely_benign | 0.0662 | benign | -0.421 | Destabilizing | 0.004 | N | 0.437 | neutral | None | None | None | None | N |
K/S | 0.3706 | ambiguous | 0.2735 | benign | -0.909 | Destabilizing | 0.399 | N | 0.582 | neutral | None | None | None | None | N |
K/T | 0.1191 | likely_benign | 0.1004 | benign | -0.621 | Destabilizing | 0.638 | D | 0.665 | neutral | None | None | None | None | N |
K/V | 0.2163 | likely_benign | 0.1753 | benign | 0.324 | Stabilizing | 0.7 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/W | 0.615 | likely_pathogenic | 0.4946 | ambiguous | 0.033 | Stabilizing | 0.982 | D | 0.643 | neutral | None | None | None | None | N |
K/Y | 0.505 | ambiguous | 0.4046 | ambiguous | 0.333 | Stabilizing | 0.826 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.