Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC951328762;28763;28764 chr2:178709782;178709781;178709780chr2:179574509;179574508;179574507
N2AB919627811;27812;27813 chr2:178709782;178709781;178709780chr2:179574509;179574508;179574507
N2A826925030;25031;25032 chr2:178709782;178709781;178709780chr2:179574509;179574508;179574507
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-81
  • Domain position: 21
  • Structural Position: 30
  • Q(SASA): 0.1082
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs143420988 -1.227 0.151 None 0.372 0.23 None gnomAD-3.1.2 6.57E-06 None None None None N None 2.41E-05 0 0 0 0 None 0 0 0 0 0
L/F rs143420988 -1.227 0.151 None 0.372 0.23 None 1000 genomes 1.99681E-04 None None None None N None 8E-04 0 None None 0 0 None None None 0 None
L/F rs143420988 -1.227 0.151 None 0.372 0.23 None gnomAD-4.0.0 6.56616E-06 None None None None N None 2.40651E-05 0 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.8767 likely_pathogenic 0.9041 pathogenic -2.299 Highly Destabilizing 0.97 D 0.715 prob.delet. None None None None N
L/C 0.9308 likely_pathogenic 0.9481 pathogenic -1.506 Destabilizing 1.0 D 0.803 deleterious None None None None N
L/D 0.9987 likely_pathogenic 0.9994 pathogenic -2.828 Highly Destabilizing 0.999 D 0.898 deleterious None None None None N
L/E 0.9896 likely_pathogenic 0.9943 pathogenic -2.529 Highly Destabilizing 0.999 D 0.891 deleterious None None None None N
L/F 0.4623 ambiguous 0.4925 ambiguous -1.353 Destabilizing 0.151 N 0.372 neutral None None None None N
L/G 0.9835 likely_pathogenic 0.99 pathogenic -2.873 Highly Destabilizing 0.996 D 0.873 deleterious None None None None N
L/H 0.9803 likely_pathogenic 0.9898 pathogenic -2.417 Highly Destabilizing 1.0 D 0.898 deleterious None None None None N
L/I 0.1492 likely_benign 0.1623 benign -0.599 Destabilizing 0.248 N 0.301 neutral None None None None N
L/K 0.9852 likely_pathogenic 0.9929 pathogenic -1.835 Destabilizing 0.996 D 0.843 deleterious None None None None N
L/M 0.1973 likely_benign 0.2249 benign -0.617 Destabilizing 0.871 D 0.401 neutral None None None None N
L/N 0.9933 likely_pathogenic 0.9967 pathogenic -2.462 Highly Destabilizing 0.999 D 0.899 deleterious None None None None N
L/P 0.9959 likely_pathogenic 0.9976 pathogenic -1.153 Destabilizing 0.998 D 0.898 deleterious None None None None N
L/Q 0.9636 likely_pathogenic 0.9817 pathogenic -2.151 Highly Destabilizing 0.996 D 0.875 deleterious None None None None N
L/R 0.9741 likely_pathogenic 0.9856 pathogenic -1.877 Destabilizing 0.994 D 0.874 deleterious None None None None N
L/S 0.9857 likely_pathogenic 0.9919 pathogenic -3.068 Highly Destabilizing 0.996 D 0.828 deleterious None None None None N
L/T 0.9207 likely_pathogenic 0.9452 pathogenic -2.601 Highly Destabilizing 0.985 D 0.782 deleterious None None None None N
L/V 0.2285 likely_benign 0.2376 benign -1.153 Destabilizing 0.835 D 0.574 neutral None None None None N
L/W 0.8852 likely_pathogenic 0.9189 pathogenic -1.712 Destabilizing 1.0 D 0.878 deleterious None None None None N
L/Y 0.9172 likely_pathogenic 0.9384 pathogenic -1.405 Destabilizing 0.983 D 0.793 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.