Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9518 | 28777;28778;28779 | chr2:178709767;178709766;178709765 | chr2:179574494;179574493;179574492 |
N2AB | 9201 | 27826;27827;27828 | chr2:178709767;178709766;178709765 | chr2:179574494;179574493;179574492 |
N2A | 8274 | 25045;25046;25047 | chr2:178709767;178709766;178709765 | chr2:179574494;179574493;179574492 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.046 | None | 0.147 | 0.108 | 0.231231049324 | gnomAD-4.0.0 | 1.59125E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85798E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6964 | likely_pathogenic | 0.7238 | pathogenic | -0.732 | Destabilizing | 0.999 | D | 0.513 | neutral | None | None | None | None | N |
A/D | 0.6437 | likely_pathogenic | 0.7374 | pathogenic | -0.298 | Destabilizing | 0.896 | D | 0.573 | neutral | None | None | None | None | N |
A/E | 0.5269 | ambiguous | 0.6247 | pathogenic | -0.436 | Destabilizing | 0.919 | D | 0.531 | neutral | None | None | None | None | N |
A/F | 0.4734 | ambiguous | 0.5133 | ambiguous | -0.82 | Destabilizing | 0.996 | D | 0.621 | neutral | None | None | None | None | N |
A/G | 0.2309 | likely_benign | 0.2569 | benign | -0.352 | Destabilizing | 0.64 | D | 0.469 | neutral | None | None | None | None | N |
A/H | 0.7109 | likely_pathogenic | 0.7646 | pathogenic | -0.43 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
A/I | 0.4316 | ambiguous | 0.443 | ambiguous | -0.228 | Destabilizing | 0.976 | D | 0.519 | neutral | None | None | None | None | N |
A/K | 0.7768 | likely_pathogenic | 0.8376 | pathogenic | -0.597 | Destabilizing | 0.919 | D | 0.521 | neutral | None | None | None | None | N |
A/L | 0.3016 | likely_benign | 0.3251 | benign | -0.228 | Destabilizing | 0.919 | D | 0.513 | neutral | None | None | None | None | N |
A/M | 0.3602 | ambiguous | 0.3681 | ambiguous | -0.286 | Destabilizing | 0.999 | D | 0.561 | neutral | None | None | None | None | N |
A/N | 0.4596 | ambiguous | 0.491 | ambiguous | -0.257 | Destabilizing | 0.976 | D | 0.568 | neutral | None | None | None | None | N |
A/P | 0.951 | likely_pathogenic | 0.9559 | pathogenic | -0.204 | Destabilizing | 0.984 | D | 0.519 | neutral | None | None | None | None | N |
A/Q | 0.5445 | ambiguous | 0.6086 | pathogenic | -0.51 | Destabilizing | 0.988 | D | 0.565 | neutral | None | None | None | None | N |
A/R | 0.6788 | likely_pathogenic | 0.7574 | pathogenic | -0.187 | Destabilizing | 0.976 | D | 0.559 | neutral | None | None | None | None | N |
A/S | 0.0954 | likely_benign | 0.1064 | benign | -0.512 | Destabilizing | 0.046 | N | 0.147 | neutral | None | None | None | None | N |
A/T | 0.1243 | likely_benign | 0.1192 | benign | -0.561 | Destabilizing | 0.046 | N | 0.141 | neutral | None | None | None | None | N |
A/V | 0.219 | likely_benign | 0.2315 | benign | -0.204 | Destabilizing | 0.896 | D | 0.471 | neutral | None | None | None | None | N |
A/W | 0.8909 | likely_pathogenic | 0.9148 | pathogenic | -0.988 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
A/Y | 0.6992 | likely_pathogenic | 0.7382 | pathogenic | -0.613 | Destabilizing | 0.996 | D | 0.626 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.