Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9528 | 28807;28808;28809 | chr2:178709737;178709736;178709735 | chr2:179574464;179574463;179574462 |
N2AB | 9211 | 27856;27857;27858 | chr2:178709737;178709736;178709735 | chr2:179574464;179574463;179574462 |
N2A | 8284 | 25075;25076;25077 | chr2:178709737;178709736;178709735 | chr2:179574464;179574463;179574462 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 0.995 | None | 0.562 | 0.308 | 0.360961692134 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9437 | likely_pathogenic | 0.9481 | pathogenic | -2.664 | Highly Destabilizing | 0.919 | D | 0.597 | neutral | None | None | None | None | N |
Y/C | 0.4683 | ambiguous | 0.4806 | ambiguous | -1.223 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
Y/D | 0.9167 | likely_pathogenic | 0.9326 | pathogenic | -1.707 | Destabilizing | 0.984 | D | 0.716 | prob.delet. | None | None | None | None | N |
Y/E | 0.9422 | likely_pathogenic | 0.9511 | pathogenic | -1.601 | Destabilizing | 0.988 | D | 0.665 | neutral | None | None | None | None | N |
Y/F | 0.1177 | likely_benign | 0.1037 | benign | -1.12 | Destabilizing | 0.896 | D | 0.472 | neutral | None | None | None | None | N |
Y/G | 0.8965 | likely_pathogenic | 0.904 | pathogenic | -3.001 | Highly Destabilizing | 0.988 | D | 0.687 | prob.neutral | None | None | None | None | N |
Y/H | 0.4953 | ambiguous | 0.5092 | ambiguous | -1.346 | Destabilizing | 0.995 | D | 0.562 | neutral | None | None | None | None | N |
Y/I | 0.8224 | likely_pathogenic | 0.8486 | pathogenic | -1.611 | Destabilizing | 0.851 | D | 0.526 | neutral | None | None | None | None | N |
Y/K | 0.9196 | likely_pathogenic | 0.9329 | pathogenic | -1.336 | Destabilizing | 0.988 | D | 0.667 | neutral | None | None | None | None | N |
Y/L | 0.656 | likely_pathogenic | 0.6749 | pathogenic | -1.611 | Destabilizing | 0.015 | N | 0.321 | neutral | None | None | None | None | N |
Y/M | 0.8204 | likely_pathogenic | 0.8301 | pathogenic | -1.252 | Destabilizing | 0.976 | D | 0.659 | neutral | None | None | None | None | N |
Y/N | 0.6373 | likely_pathogenic | 0.6741 | pathogenic | -1.668 | Destabilizing | 0.984 | D | 0.689 | prob.neutral | None | None | None | None | N |
Y/P | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -1.962 | Destabilizing | 0.996 | D | 0.725 | prob.delet. | None | None | None | None | N |
Y/Q | 0.8725 | likely_pathogenic | 0.8864 | pathogenic | -1.646 | Destabilizing | 0.996 | D | 0.651 | neutral | None | None | None | None | N |
Y/R | 0.8466 | likely_pathogenic | 0.8605 | pathogenic | -0.82 | Destabilizing | 0.988 | D | 0.691 | prob.neutral | None | None | None | None | N |
Y/S | 0.7613 | likely_pathogenic | 0.7831 | pathogenic | -2.215 | Highly Destabilizing | 0.811 | D | 0.639 | neutral | None | None | None | None | N |
Y/T | 0.907 | likely_pathogenic | 0.9205 | pathogenic | -2.011 | Highly Destabilizing | 0.132 | N | 0.501 | neutral | None | None | None | None | N |
Y/V | 0.7778 | likely_pathogenic | 0.8047 | pathogenic | -1.962 | Destabilizing | 0.851 | D | 0.529 | neutral | None | None | None | None | N |
Y/W | 0.646 | likely_pathogenic | 0.6207 | pathogenic | -0.578 | Destabilizing | 0.999 | D | 0.56 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.