Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9535 | 28828;28829;28830 | chr2:178709716;178709715;178709714 | chr2:179574443;179574442;179574441 |
N2AB | 9218 | 27877;27878;27879 | chr2:178709716;178709715;178709714 | chr2:179574443;179574442;179574441 |
N2A | 8291 | 25096;25097;25098 | chr2:178709716;178709715;178709714 | chr2:179574443;179574442;179574441 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | rs778021049 | 0.221 | 0.003 | None | 0.161 | 0.099 | 0.163833314356 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.66908E-04 | None | 0 | None | 0 | 0 | 0 |
Q/K | rs778021049 | 0.221 | 0.003 | None | 0.161 | 0.099 | 0.163833314356 | gnomAD-4.0.0 | 2.73669E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 7.55744E-05 | None | 0 | 0 | 8.99442E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1313 | likely_benign | 0.1253 | benign | -0.053 | Destabilizing | 0.004 | N | 0.261 | neutral | None | None | None | None | I |
Q/C | 0.2446 | likely_benign | 0.2173 | benign | -0.065 | Destabilizing | 0.497 | N | 0.379 | neutral | None | None | None | None | I |
Q/D | 0.2105 | likely_benign | 0.1953 | benign | -0.011 | Destabilizing | 0.018 | N | 0.175 | neutral | None | None | None | None | I |
Q/E | 0.082 | likely_benign | 0.0786 | benign | -0.044 | Destabilizing | 0.001 | N | 0.178 | neutral | None | None | None | None | I |
Q/F | 0.2657 | likely_benign | 0.2261 | benign | -0.392 | Destabilizing | None | N | 0.173 | neutral | None | None | None | None | I |
Q/G | 0.1832 | likely_benign | 0.1684 | benign | -0.196 | Destabilizing | 0.008 | N | 0.319 | neutral | None | None | None | None | I |
Q/H | 0.0686 | likely_benign | 0.0647 | benign | 0.044 | Stabilizing | None | N | 0.09 | neutral | None | None | None | None | I |
Q/I | 0.1911 | likely_benign | 0.1714 | benign | 0.226 | Stabilizing | 0.018 | N | 0.409 | neutral | None | None | None | None | I |
Q/K | 0.0756 | likely_benign | 0.0776 | benign | 0.042 | Stabilizing | 0.003 | N | 0.161 | neutral | None | None | None | None | I |
Q/L | 0.0774 | likely_benign | 0.0728 | benign | 0.226 | Stabilizing | 0.001 | N | 0.295 | neutral | None | None | None | None | I |
Q/M | 0.2409 | likely_benign | 0.2181 | benign | 0.118 | Stabilizing | 0.497 | N | 0.233 | neutral | None | None | None | None | I |
Q/N | 0.1189 | likely_benign | 0.1144 | benign | -0.293 | Destabilizing | 0.004 | N | 0.169 | neutral | None | None | None | None | I |
Q/P | 0.0901 | likely_benign | 0.0884 | benign | 0.159 | Stabilizing | 0.028 | N | 0.424 | neutral | None | None | None | None | I |
Q/R | 0.0777 | likely_benign | 0.0772 | benign | 0.237 | Stabilizing | None | N | 0.098 | neutral | None | None | None | None | I |
Q/S | 0.1293 | likely_benign | 0.1214 | benign | -0.257 | Destabilizing | 0.008 | N | 0.159 | neutral | None | None | None | None | I |
Q/T | 0.1228 | likely_benign | 0.1164 | benign | -0.153 | Destabilizing | 0.018 | N | 0.319 | neutral | None | None | None | None | I |
Q/V | 0.1471 | likely_benign | 0.1325 | benign | 0.159 | Stabilizing | 0.008 | N | 0.349 | neutral | None | None | None | None | I |
Q/W | 0.2711 | likely_benign | 0.2342 | benign | -0.466 | Destabilizing | 0.245 | N | 0.373 | neutral | None | None | None | None | I |
Q/Y | 0.1361 | likely_benign | 0.1184 | benign | -0.167 | Destabilizing | None | N | 0.139 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.