Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9543 | 28852;28853;28854 | chr2:178709692;178709691;178709690 | chr2:179574419;179574418;179574417 |
N2AB | 9226 | 27901;27902;27903 | chr2:178709692;178709691;178709690 | chr2:179574419;179574418;179574417 |
N2A | 8299 | 25120;25121;25122 | chr2:178709692;178709691;178709690 | chr2:179574419;179574418;179574417 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs752853962 | 0.255 | 0.062 | None | 0.37 | 0.097 | 0.402326594622 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
T/I | rs752853962 | 0.255 | 0.062 | None | 0.37 | 0.097 | 0.402326594622 | gnomAD-4.0.0 | 4.10506E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39665E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0782 | likely_benign | 0.0782 | benign | -0.53 | Destabilizing | 0.027 | N | 0.334 | neutral | None | None | None | None | N |
T/C | 0.3473 | ambiguous | 0.3606 | ambiguous | -0.412 | Destabilizing | 0.824 | D | 0.411 | neutral | None | None | None | None | N |
T/D | 0.3123 | likely_benign | 0.2982 | benign | -0.031 | Destabilizing | 0.149 | N | 0.381 | neutral | None | None | None | None | N |
T/E | 0.3001 | likely_benign | 0.3006 | benign | -0.018 | Destabilizing | 0.081 | N | 0.333 | neutral | None | None | None | None | N |
T/F | 0.1663 | likely_benign | 0.1624 | benign | -0.561 | Destabilizing | 0.38 | N | 0.521 | neutral | None | None | None | None | N |
T/G | 0.2158 | likely_benign | 0.217 | benign | -0.794 | Destabilizing | 0.081 | N | 0.414 | neutral | None | None | None | None | N |
T/H | 0.1909 | likely_benign | 0.1921 | benign | -1.046 | Destabilizing | 0.824 | D | 0.475 | neutral | None | None | None | None | N |
T/I | 0.1143 | likely_benign | 0.1036 | benign | 0.079 | Stabilizing | 0.062 | N | 0.37 | neutral | None | None | None | None | N |
T/K | 0.2255 | likely_benign | 0.2288 | benign | -0.651 | Destabilizing | 0.062 | N | 0.327 | neutral | None | None | None | None | N |
T/L | 0.087 | likely_benign | 0.0852 | benign | 0.079 | Stabilizing | 0.012 | N | 0.355 | neutral | None | None | None | None | N |
T/M | 0.0895 | likely_benign | 0.0957 | benign | 0.076 | Stabilizing | 0.005 | N | 0.375 | neutral | None | None | None | None | N |
T/N | 0.1043 | likely_benign | 0.1025 | benign | -0.597 | Destabilizing | 0.081 | N | 0.357 | neutral | None | None | None | None | N |
T/P | 0.5191 | ambiguous | 0.5126 | ambiguous | -0.09 | Destabilizing | 0.484 | N | 0.416 | neutral | None | None | None | None | N |
T/Q | 0.2184 | likely_benign | 0.2325 | benign | -0.66 | Destabilizing | 0.38 | N | 0.427 | neutral | None | None | None | None | N |
T/R | 0.1815 | likely_benign | 0.1833 | benign | -0.492 | Destabilizing | 0.317 | N | 0.418 | neutral | None | None | None | None | N |
T/S | 0.0827 | likely_benign | 0.0833 | benign | -0.83 | Destabilizing | None | N | 0.125 | neutral | None | None | None | None | N |
T/V | 0.1134 | likely_benign | 0.1075 | benign | -0.09 | Destabilizing | 0.081 | N | 0.323 | neutral | None | None | None | None | N |
T/W | 0.5106 | ambiguous | 0.5181 | ambiguous | -0.588 | Destabilizing | 0.935 | D | 0.528 | neutral | None | None | None | None | N |
T/Y | 0.2161 | likely_benign | 0.2216 | benign | -0.325 | Destabilizing | 0.555 | D | 0.51 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.