Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9546 | 28861;28862;28863 | chr2:178709683;178709682;178709681 | chr2:179574410;179574409;179574408 |
N2AB | 9229 | 27910;27911;27912 | chr2:178709683;178709682;178709681 | chr2:179574410;179574409;179574408 |
N2A | 8302 | 25129;25130;25131 | chr2:178709683;178709682;178709681 | chr2:179574410;179574409;179574408 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.801 | None | 0.298 | 0.121 | 0.107399877778 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
N/S | None | None | 0.062 | None | 0.112 | 0.092 | 0.0846915920261 | gnomAD-4.0.0 | 1.59105E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85791E-06 | 0 | 0 |
N/Y | None | None | 0.989 | None | 0.311 | 0.296 | 0.407767136052 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4331 | ambiguous | 0.4152 | ambiguous | -0.087 | Destabilizing | 0.525 | D | 0.33 | neutral | None | None | None | None | N |
N/C | 0.6112 | likely_pathogenic | 0.6089 | pathogenic | 0.106 | Stabilizing | 0.998 | D | 0.338 | neutral | None | None | None | None | N |
N/D | 0.1525 | likely_benign | 0.1421 | benign | 0.09 | Stabilizing | 0.005 | N | 0.1 | neutral | None | None | None | None | N |
N/E | 0.4746 | ambiguous | 0.4496 | ambiguous | 0.024 | Stabilizing | 0.525 | D | 0.31 | neutral | None | None | None | None | N |
N/F | 0.8222 | likely_pathogenic | 0.7904 | pathogenic | -0.724 | Destabilizing | 0.991 | D | 0.328 | neutral | None | None | None | None | N |
N/G | 0.3184 | likely_benign | 0.2905 | benign | -0.164 | Destabilizing | 0.688 | D | 0.343 | neutral | None | None | None | None | N |
N/H | 0.1861 | likely_benign | 0.1732 | benign | -0.183 | Destabilizing | 0.989 | D | 0.303 | neutral | None | None | None | None | N |
N/I | 0.6391 | likely_pathogenic | 0.6285 | pathogenic | 0.013 | Stabilizing | 0.966 | D | 0.355 | neutral | None | None | None | None | N |
N/K | 0.4456 | ambiguous | 0.407 | ambiguous | 0.1 | Stabilizing | 0.801 | D | 0.298 | neutral | None | None | None | None | N |
N/L | 0.5632 | ambiguous | 0.5499 | ambiguous | 0.013 | Stabilizing | 0.915 | D | 0.378 | neutral | None | None | None | None | N |
N/M | 0.6039 | likely_pathogenic | 0.5788 | pathogenic | 0.066 | Stabilizing | 0.998 | D | 0.313 | neutral | None | None | None | None | N |
N/P | 0.8642 | likely_pathogenic | 0.8644 | pathogenic | 0.002 | Stabilizing | 0.974 | D | 0.351 | neutral | None | None | None | None | N |
N/Q | 0.4282 | ambiguous | 0.4127 | ambiguous | -0.278 | Destabilizing | 0.974 | D | 0.279 | neutral | None | None | None | None | N |
N/R | 0.5421 | ambiguous | 0.4934 | ambiguous | 0.161 | Stabilizing | 0.974 | D | 0.277 | neutral | None | None | None | None | N |
N/S | 0.1343 | likely_benign | 0.1323 | benign | -0.061 | Destabilizing | 0.062 | N | 0.112 | neutral | None | None | None | None | N |
N/T | 0.3089 | likely_benign | 0.3056 | benign | -0.019 | Destabilizing | 0.669 | D | 0.3 | neutral | None | None | None | None | N |
N/V | 0.6368 | likely_pathogenic | 0.6258 | pathogenic | 0.002 | Stabilizing | 0.974 | D | 0.361 | neutral | None | None | None | None | N |
N/W | 0.898 | likely_pathogenic | 0.8833 | pathogenic | -0.877 | Destabilizing | 0.998 | D | 0.494 | neutral | None | None | None | None | N |
N/Y | 0.2919 | likely_benign | 0.264 | benign | -0.544 | Destabilizing | 0.989 | D | 0.311 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.