Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9547 | 28864;28865;28866 | chr2:178709680;178709679;178709678 | chr2:179574407;179574406;179574405 |
N2AB | 9230 | 27913;27914;27915 | chr2:178709680;178709679;178709678 | chr2:179574407;179574406;179574405 |
N2A | 8303 | 25132;25133;25134 | chr2:178709680;178709679;178709678 | chr2:179574407;179574406;179574405 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs727505185 | -0.031 | 0.992 | None | 0.604 | 0.26 | 0.168933306366 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.85E-06 | 0 |
N/K | rs727505185 | -0.031 | 0.992 | None | 0.604 | 0.26 | 0.168933306366 | gnomAD-4.0.0 | 1.59109E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85802E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5626 | ambiguous | 0.5211 | ambiguous | -0.866 | Destabilizing | 0.988 | D | 0.645 | neutral | None | None | None | None | N |
N/C | 0.6096 | likely_pathogenic | 0.6049 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
N/D | 0.3474 | ambiguous | 0.3103 | benign | -0.395 | Destabilizing | 0.992 | D | 0.555 | neutral | None | None | None | None | N |
N/E | 0.8079 | likely_pathogenic | 0.7902 | pathogenic | -0.279 | Destabilizing | 0.994 | D | 0.603 | neutral | None | None | None | None | N |
N/F | 0.8967 | likely_pathogenic | 0.8904 | pathogenic | -0.576 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
N/G | 0.4453 | ambiguous | 0.391 | ambiguous | -1.227 | Destabilizing | 0.994 | D | 0.555 | neutral | None | None | None | None | N |
N/H | 0.2333 | likely_benign | 0.2198 | benign | -0.933 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
N/I | 0.7388 | likely_pathogenic | 0.7501 | pathogenic | 0.059 | Stabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
N/K | 0.7345 | likely_pathogenic | 0.7195 | pathogenic | -0.228 | Destabilizing | 0.992 | D | 0.604 | neutral | None | None | None | None | N |
N/L | 0.6625 | likely_pathogenic | 0.6711 | pathogenic | 0.059 | Stabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
N/M | 0.7549 | likely_pathogenic | 0.7462 | pathogenic | 0.443 | Stabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
N/P | 0.904 | likely_pathogenic | 0.8835 | pathogenic | -0.219 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
N/Q | 0.629 | likely_pathogenic | 0.6169 | pathogenic | -0.747 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
N/R | 0.7048 | likely_pathogenic | 0.6942 | pathogenic | -0.331 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
N/S | 0.1186 | likely_benign | 0.1138 | benign | -0.885 | Destabilizing | 0.825 | D | 0.287 | neutral | None | None | None | None | N |
N/T | 0.3734 | ambiguous | 0.365 | ambiguous | -0.565 | Destabilizing | 0.984 | D | 0.569 | neutral | None | None | None | None | N |
N/V | 0.7343 | likely_pathogenic | 0.7409 | pathogenic | -0.219 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
N/W | 0.9627 | likely_pathogenic | 0.9603 | pathogenic | -0.347 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
N/Y | 0.4579 | ambiguous | 0.4494 | ambiguous | -0.138 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.