Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9555 | 28888;28889;28890 | chr2:178709656;178709655;178709654 | chr2:179574383;179574382;179574381 |
N2AB | 9238 | 27937;27938;27939 | chr2:178709656;178709655;178709654 | chr2:179574383;179574382;179574381 |
N2A | 8311 | 25156;25157;25158 | chr2:178709656;178709655;178709654 | chr2:179574383;179574382;179574381 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs760060633 | -0.028 | 0.001 | None | 0.193 | 0.076 | 0.12205267543 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/T | rs760060633 | -0.028 | 0.001 | None | 0.193 | 0.076 | 0.12205267543 | gnomAD-4.0.0 | 1.59112E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2352 | likely_benign | 0.2328 | benign | -0.028 | Destabilizing | 0.016 | N | 0.36 | neutral | None | None | None | None | N |
K/C | 0.5775 | likely_pathogenic | 0.5718 | pathogenic | -0.147 | Destabilizing | 0.864 | D | 0.392 | neutral | None | None | None | None | N |
K/D | 0.3145 | likely_benign | 0.3076 | benign | 0.162 | Stabilizing | 0.038 | N | 0.335 | neutral | None | None | None | None | N |
K/E | 0.1157 | likely_benign | 0.1064 | benign | 0.162 | Stabilizing | 0.012 | N | 0.293 | neutral | None | None | None | None | N |
K/F | 0.6428 | likely_pathogenic | 0.6017 | pathogenic | -0.294 | Destabilizing | 0.356 | N | 0.414 | neutral | None | None | None | None | N |
K/G | 0.2852 | likely_benign | 0.2715 | benign | -0.225 | Destabilizing | 0.016 | N | 0.345 | neutral | None | None | None | None | N |
K/H | 0.214 | likely_benign | 0.2097 | benign | -0.571 | Destabilizing | 0.356 | N | 0.366 | neutral | None | None | None | None | N |
K/I | 0.3116 | likely_benign | 0.2891 | benign | 0.407 | Stabilizing | 0.171 | N | 0.433 | neutral | None | None | None | None | N |
K/L | 0.2951 | likely_benign | 0.2755 | benign | 0.407 | Stabilizing | 0.038 | N | 0.377 | neutral | None | None | None | None | N |
K/M | 0.177 | likely_benign | 0.1712 | benign | 0.344 | Stabilizing | 0.628 | D | 0.367 | neutral | None | None | None | None | N |
K/N | 0.1888 | likely_benign | 0.1858 | benign | 0.309 | Stabilizing | None | N | 0.095 | neutral | None | None | None | None | N |
K/P | 0.7825 | likely_pathogenic | 0.7365 | pathogenic | 0.29 | Stabilizing | 0.356 | N | 0.396 | neutral | None | None | None | None | N |
K/Q | 0.1031 | likely_benign | 0.0986 | benign | 0.087 | Stabilizing | 0.055 | N | 0.348 | neutral | None | None | None | None | N |
K/R | 0.0798 | likely_benign | 0.0761 | benign | 0.039 | Stabilizing | None | N | 0.233 | neutral | None | None | None | None | N |
K/S | 0.2363 | likely_benign | 0.2328 | benign | -0.23 | Destabilizing | None | N | 0.089 | neutral | None | None | None | None | N |
K/T | 0.1349 | likely_benign | 0.1339 | benign | -0.081 | Destabilizing | 0.001 | N | 0.193 | neutral | None | None | None | None | N |
K/V | 0.2857 | likely_benign | 0.2773 | benign | 0.29 | Stabilizing | 0.038 | N | 0.394 | neutral | None | None | None | None | N |
K/W | 0.6475 | likely_pathogenic | 0.5971 | pathogenic | -0.277 | Destabilizing | 0.864 | D | 0.449 | neutral | None | None | None | None | N |
K/Y | 0.4659 | ambiguous | 0.4287 | ambiguous | 0.091 | Stabilizing | 0.356 | N | 0.393 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.