Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9558 | 28897;28898;28899 | chr2:178709647;178709646;178709645 | chr2:179574374;179574373;179574372 |
N2AB | 9241 | 27946;27947;27948 | chr2:178709647;178709646;178709645 | chr2:179574374;179574373;179574372 |
N2A | 8314 | 25165;25166;25167 | chr2:178709647;178709646;178709645 | chr2:179574374;179574373;179574372 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs868771235 | None | 0.028 | None | 0.172 | 0.127 | 0.228597637076 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
M/V | None | None | 0.001 | None | 0.075 | 0.104 | 0.130388298395 | gnomAD-4.0.0 | 1.59111E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85806E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.2324 | likely_benign | 0.233 | benign | -0.73 | Destabilizing | 0.032 | N | 0.231 | neutral | None | None | None | None | I |
M/C | 0.6683 | likely_pathogenic | 0.6638 | pathogenic | -0.567 | Destabilizing | 0.901 | D | 0.251 | neutral | None | None | None | None | I |
M/D | 0.5556 | ambiguous | 0.5666 | pathogenic | 0.057 | Stabilizing | 0.148 | N | 0.317 | neutral | None | None | None | None | I |
M/E | 0.2399 | likely_benign | 0.2346 | benign | -0.001 | Destabilizing | 0.036 | N | 0.298 | neutral | None | None | None | None | I |
M/F | 0.2558 | likely_benign | 0.2536 | benign | -0.373 | Destabilizing | 0.174 | N | 0.19 | neutral | None | None | None | None | I |
M/G | 0.3534 | ambiguous | 0.3541 | ambiguous | -0.911 | Destabilizing | 0.148 | N | 0.282 | neutral | None | None | None | None | I |
M/H | 0.3679 | ambiguous | 0.3737 | ambiguous | -0.064 | Destabilizing | 0.749 | D | 0.335 | neutral | None | None | None | None | I |
M/I | 0.1778 | likely_benign | 0.1768 | benign | -0.342 | Destabilizing | 0.028 | N | 0.172 | neutral | None | None | None | None | I |
M/K | 0.0907 | likely_benign | 0.0954 | benign | 0.252 | Stabilizing | 0.001 | N | 0.127 | neutral | None | None | None | None | I |
M/L | 0.0952 | likely_benign | 0.0957 | benign | -0.342 | Destabilizing | None | N | 0.079 | neutral | None | None | None | None | I |
M/N | 0.2909 | likely_benign | 0.3083 | benign | 0.421 | Stabilizing | 0.148 | N | 0.359 | neutral | None | None | None | None | I |
M/P | 0.3032 | likely_benign | 0.3209 | benign | -0.443 | Destabilizing | 0.001 | N | 0.147 | neutral | None | None | None | None | I |
M/Q | 0.1431 | likely_benign | 0.1521 | benign | 0.213 | Stabilizing | 0.002 | N | 0.095 | neutral | None | None | None | None | I |
M/R | 0.0952 | likely_benign | 0.0936 | benign | 0.799 | Stabilizing | 0.061 | N | 0.282 | neutral | None | None | None | None | I |
M/S | 0.2545 | likely_benign | 0.2763 | benign | -0.039 | Destabilizing | 0.07 | N | 0.272 | neutral | None | None | None | None | I |
M/T | 0.1499 | likely_benign | 0.1516 | benign | 0.001 | Stabilizing | 0.054 | N | 0.286 | neutral | None | None | None | None | I |
M/V | 0.0786 | likely_benign | 0.0806 | benign | -0.443 | Destabilizing | 0.001 | N | 0.075 | neutral | None | None | None | None | I |
M/W | 0.439 | ambiguous | 0.4256 | ambiguous | -0.308 | Destabilizing | 0.901 | D | 0.265 | neutral | None | None | None | None | I |
M/Y | 0.4536 | ambiguous | 0.4581 | ambiguous | -0.186 | Destabilizing | 0.46 | N | 0.335 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.