Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9559 | 28900;28901;28902 | chr2:178709644;178709643;178709642 | chr2:179574371;179574370;179574369 |
N2AB | 9242 | 27949;27950;27951 | chr2:178709644;178709643;178709642 | chr2:179574371;179574370;179574369 |
N2A | 8315 | 25168;25169;25170 | chr2:178709644;178709643;178709642 | chr2:179574371;179574370;179574369 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | None | None | 0.158 | 0.108 | 0.0401082797425 | gnomAD-4.0.0 | 1.5911E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02371E-05 |
N/K | None | None | 0.004 | None | 0.149 | 0.029 | 0.0138822411134 | gnomAD-4.0.0 | 6.84181E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99447E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.076 | likely_benign | 0.0735 | benign | -0.152 | Destabilizing | None | N | 0.121 | neutral | None | None | None | None | N |
N/C | 0.1833 | likely_benign | 0.1812 | benign | 0.292 | Stabilizing | 0.132 | N | 0.271 | neutral | None | None | None | None | N |
N/D | 0.0708 | likely_benign | 0.0606 | benign | 0.009 | Stabilizing | None | N | 0.158 | neutral | None | None | None | None | N |
N/E | 0.1446 | likely_benign | 0.1253 | benign | -0.058 | Destabilizing | 0.002 | N | 0.15 | neutral | None | None | None | None | N |
N/F | 0.3298 | likely_benign | 0.2881 | benign | -0.731 | Destabilizing | 0.021 | N | 0.401 | neutral | None | None | None | None | N |
N/G | 0.1013 | likely_benign | 0.0907 | benign | -0.247 | Destabilizing | None | N | 0.104 | neutral | None | None | None | None | N |
N/H | 0.1068 | likely_benign | 0.0934 | benign | -0.294 | Destabilizing | 0.103 | N | 0.238 | neutral | None | None | None | None | N |
N/I | 0.1468 | likely_benign | 0.1254 | benign | 0.003 | Stabilizing | None | N | 0.309 | neutral | None | None | None | None | N |
N/K | 0.1473 | likely_benign | 0.1295 | benign | 0.121 | Stabilizing | 0.004 | N | 0.149 | neutral | None | None | None | None | N |
N/L | 0.1428 | likely_benign | 0.13 | benign | 0.003 | Stabilizing | None | N | 0.177 | neutral | None | None | None | None | N |
N/M | 0.2017 | likely_benign | 0.1842 | benign | 0.208 | Stabilizing | 0.069 | N | 0.325 | neutral | None | None | None | None | N |
N/P | 0.3177 | likely_benign | 0.2976 | benign | -0.026 | Destabilizing | None | N | 0.161 | neutral | None | None | None | None | N |
N/Q | 0.1761 | likely_benign | 0.154 | benign | -0.2 | Destabilizing | 0.009 | N | 0.182 | neutral | None | None | None | None | N |
N/R | 0.1594 | likely_benign | 0.139 | benign | 0.213 | Stabilizing | 0.009 | N | 0.181 | neutral | None | None | None | None | N |
N/S | 0.0592 | likely_benign | 0.0571 | benign | 0.042 | Stabilizing | None | N | 0.118 | neutral | None | None | None | None | N |
N/T | 0.0777 | likely_benign | 0.075 | benign | 0.083 | Stabilizing | None | N | 0.109 | neutral | None | None | None | None | N |
N/V | 0.1244 | likely_benign | 0.1109 | benign | -0.026 | Destabilizing | None | N | 0.178 | neutral | None | None | None | None | N |
N/W | 0.5314 | ambiguous | 0.4696 | ambiguous | -0.846 | Destabilizing | 0.316 | N | 0.244 | neutral | None | None | None | None | N |
N/Y | 0.1283 | likely_benign | 0.1111 | benign | -0.535 | Destabilizing | 0.032 | N | 0.369 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.