Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 956 | 3091;3092;3093 | chr2:178783040;178783039;178783038 | chr2:179647767;179647766;179647765 |
N2AB | 956 | 3091;3092;3093 | chr2:178783040;178783039;178783038 | chr2:179647767;179647766;179647765 |
N2A | 956 | 3091;3092;3093 | chr2:178783040;178783039;178783038 | chr2:179647767;179647766;179647765 |
N2B | 910 | 2953;2954;2955 | chr2:178783040;178783039;178783038 | chr2:179647767;179647766;179647765 |
Novex-1 | 910 | 2953;2954;2955 | chr2:178783040;178783039;178783038 | chr2:179647767;179647766;179647765 |
Novex-2 | 910 | 2953;2954;2955 | chr2:178783040;178783039;178783038 | chr2:179647767;179647766;179647765 |
Novex-3 | 956 | 3091;3092;3093 | chr2:178783040;178783039;178783038 | chr2:179647767;179647766;179647765 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs1256742632 | -0.148 | 1.0 | N | 0.689 | 0.565 | 0.710140478693 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14837E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/V | rs1256742632 | -0.148 | 1.0 | N | 0.689 | 0.565 | 0.710140478693 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.751 | likely_pathogenic | 0.8108 | pathogenic | -0.778 | Destabilizing | 0.999 | D | 0.58 | neutral | N | 0.511264372 | None | None | N |
E/C | 0.9971 | likely_pathogenic | 0.9977 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/D | 0.9366 | likely_pathogenic | 0.9572 | pathogenic | -0.705 | Destabilizing | 0.999 | D | 0.412 | neutral | N | 0.520620259 | None | None | N |
E/F | 0.999 | likely_pathogenic | 0.9993 | pathogenic | -0.155 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/G | 0.9157 | likely_pathogenic | 0.9393 | pathogenic | -1.091 | Destabilizing | 1.0 | D | 0.629 | neutral | D | 0.698406898 | None | None | N |
E/H | 0.9921 | likely_pathogenic | 0.9948 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
E/I | 0.9846 | likely_pathogenic | 0.9891 | pathogenic | 0.062 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/K | 0.8873 | likely_pathogenic | 0.9297 | pathogenic | -0.085 | Destabilizing | 0.999 | D | 0.565 | neutral | N | 0.515839153 | None | None | N |
E/L | 0.9886 | likely_pathogenic | 0.9925 | pathogenic | 0.062 | Stabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/M | 0.9864 | likely_pathogenic | 0.9903 | pathogenic | 0.276 | Stabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
E/N | 0.9792 | likely_pathogenic | 0.9862 | pathogenic | -0.717 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/P | 0.9674 | likely_pathogenic | 0.9762 | pathogenic | -0.197 | Destabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | N |
E/Q | 0.7183 | likely_pathogenic | 0.7791 | pathogenic | -0.611 | Destabilizing | 1.0 | D | 0.607 | neutral | D | 0.577583458 | None | None | N |
E/R | 0.9286 | likely_pathogenic | 0.953 | pathogenic | 0.275 | Stabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
E/S | 0.8959 | likely_pathogenic | 0.9249 | pathogenic | -0.931 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
E/T | 0.9436 | likely_pathogenic | 0.9631 | pathogenic | -0.662 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
E/V | 0.9479 | likely_pathogenic | 0.963 | pathogenic | -0.197 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.510597293 | None | None | N |
E/W | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | 0.184 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/Y | 0.9977 | likely_pathogenic | 0.9983 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.