Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9564 | 28915;28916;28917 | chr2:178709629;178709628;178709627 | chr2:179574356;179574355;179574354 |
N2AB | 9247 | 27964;27965;27966 | chr2:178709629;178709628;178709627 | chr2:179574356;179574355;179574354 |
N2A | 8320 | 25183;25184;25185 | chr2:178709629;178709628;178709627 | chr2:179574356;179574355;179574354 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs2076368966 | None | 1.0 | None | 0.87 | 0.873 | 0.885172764854 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06782E-04 | 0 |
Y/C | rs2076368966 | None | 1.0 | None | 0.87 | 0.873 | 0.885172764854 | gnomAD-4.0.0 | 6.5684E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.06782E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9941 | likely_pathogenic | 0.9959 | pathogenic | -1.892 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Y/C | 0.8894 | likely_pathogenic | 0.94 | pathogenic | -1.302 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
Y/D | 0.9981 | likely_pathogenic | 0.9986 | pathogenic | -2.348 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Y/E | 0.9988 | likely_pathogenic | 0.9992 | pathogenic | -2.098 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/F | 0.1672 | likely_benign | 0.1772 | benign | -0.55 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
Y/G | 0.9923 | likely_pathogenic | 0.994 | pathogenic | -2.342 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
Y/H | 0.9503 | likely_pathogenic | 0.9685 | pathogenic | -1.8 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
Y/I | 0.8816 | likely_pathogenic | 0.9274 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Y/K | 0.9988 | likely_pathogenic | 0.9993 | pathogenic | -1.405 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/L | 0.7666 | likely_pathogenic | 0.8054 | pathogenic | -0.414 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
Y/M | 0.9688 | likely_pathogenic | 0.9794 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Y/N | 0.9848 | likely_pathogenic | 0.9906 | pathogenic | -2.267 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/P | 0.9984 | likely_pathogenic | 0.9987 | pathogenic | -0.92 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
Y/Q | 0.9977 | likely_pathogenic | 0.9986 | pathogenic | -1.806 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/R | 0.9936 | likely_pathogenic | 0.9958 | pathogenic | -1.778 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
Y/S | 0.987 | likely_pathogenic | 0.9917 | pathogenic | -2.625 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Y/T | 0.9944 | likely_pathogenic | 0.9967 | pathogenic | -2.225 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/V | 0.8541 | likely_pathogenic | 0.8986 | pathogenic | -0.92 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
Y/W | 0.7911 | likely_pathogenic | 0.8085 | pathogenic | 0.062 | Stabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.