Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9572 | 28939;28940;28941 | chr2:178709605;178709604;178709603 | chr2:179574332;179574331;179574330 |
N2AB | 9255 | 27988;27989;27990 | chr2:178709605;178709604;178709603 | chr2:179574332;179574331;179574330 |
N2A | 8328 | 25207;25208;25209 | chr2:178709605;178709604;178709603 | chr2:179574332;179574331;179574330 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs2076363568 | None | 0.919 | None | 0.579 | 0.373 | 0.291694819147 | gnomAD-4.0.0 | 6.84279E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99582E-07 | 0 | 0 |
A/V | None | None | 0.919 | None | 0.641 | 0.364 | 0.529561333529 | gnomAD-4.0.0 | 1.59165E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8594E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7858 | likely_pathogenic | 0.774 | pathogenic | -0.811 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
A/D | 0.8103 | likely_pathogenic | 0.8835 | pathogenic | -0.524 | Destabilizing | 0.991 | D | 0.74 | deleterious | None | None | None | None | I |
A/E | 0.7353 | likely_pathogenic | 0.8348 | pathogenic | -0.674 | Destabilizing | 0.988 | D | 0.723 | prob.delet. | None | None | None | None | I |
A/F | 0.612 | likely_pathogenic | 0.6419 | pathogenic | -0.933 | Destabilizing | 0.995 | D | 0.781 | deleterious | None | None | None | None | I |
A/G | 0.3825 | ambiguous | 0.4066 | ambiguous | -0.207 | Destabilizing | 0.958 | D | 0.629 | neutral | None | None | None | None | I |
A/H | 0.8331 | likely_pathogenic | 0.8792 | pathogenic | -0.211 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
A/I | 0.5975 | likely_pathogenic | 0.6184 | pathogenic | -0.421 | Destabilizing | 0.991 | D | 0.727 | prob.delet. | None | None | None | None | I |
A/K | 0.8615 | likely_pathogenic | 0.9286 | pathogenic | -0.488 | Destabilizing | 0.991 | D | 0.726 | prob.delet. | None | None | None | None | I |
A/L | 0.5185 | ambiguous | 0.5732 | pathogenic | -0.421 | Destabilizing | 0.938 | D | 0.633 | neutral | None | None | None | None | I |
A/M | 0.5546 | ambiguous | 0.6056 | pathogenic | -0.554 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
A/N | 0.7082 | likely_pathogenic | 0.7884 | pathogenic | -0.182 | Destabilizing | 0.991 | D | 0.753 | deleterious | None | None | None | None | I |
A/P | 0.9552 | likely_pathogenic | 0.9648 | pathogenic | -0.329 | Destabilizing | 0.994 | D | 0.725 | prob.delet. | None | None | None | None | I |
A/Q | 0.7433 | likely_pathogenic | 0.8323 | pathogenic | -0.445 | Destabilizing | 0.995 | D | 0.762 | deleterious | None | None | None | None | I |
A/R | 0.7482 | likely_pathogenic | 0.849 | pathogenic | -0.073 | Destabilizing | 0.991 | D | 0.744 | deleterious | None | None | None | None | I |
A/S | 0.1856 | likely_benign | 0.1944 | benign | -0.364 | Destabilizing | 0.919 | D | 0.579 | neutral | None | None | None | None | I |
A/T | 0.2662 | likely_benign | 0.3181 | benign | -0.445 | Destabilizing | 0.142 | N | 0.477 | neutral | None | None | None | None | I |
A/V | 0.2825 | likely_benign | 0.2979 | benign | -0.329 | Destabilizing | 0.919 | D | 0.641 | neutral | None | None | None | None | I |
A/W | 0.9535 | likely_pathogenic | 0.965 | pathogenic | -1.024 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
A/Y | 0.8215 | likely_pathogenic | 0.8539 | pathogenic | -0.712 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.