Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9577 | 28954;28955;28956 | chr2:178709590;178709589;178709588 | chr2:179574317;179574316;179574315 |
N2AB | 9260 | 28003;28004;28005 | chr2:178709590;178709589;178709588 | chr2:179574317;179574316;179574315 |
N2A | 8333 | 25222;25223;25224 | chr2:178709590;178709589;178709588 | chr2:179574317;179574316;179574315 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | rs1476712853 | -1.693 | 0.669 | None | 0.735 | 0.421 | 0.803902362773 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 2.87687E-04 | 0 | 0 |
C/G | rs1476712853 | -1.693 | 0.669 | None | 0.735 | 0.421 | 0.803902362773 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 9.41E-05 | 0 | 0 | 0 | 0 |
C/G | rs1476712853 | -1.693 | 0.669 | None | 0.735 | 0.421 | 0.803902362773 | gnomAD-4.0.0 | 2.02974E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 9.17263E-05 | 0 | 1.2049E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5117 | ambiguous | 0.5 | ambiguous | -1.842 | Destabilizing | 0.525 | D | 0.587 | neutral | None | None | None | None | I |
C/D | 0.9057 | likely_pathogenic | 0.911 | pathogenic | -0.192 | Destabilizing | 0.949 | D | 0.776 | deleterious | None | None | None | None | I |
C/E | 0.9587 | likely_pathogenic | 0.9618 | pathogenic | -0.064 | Destabilizing | 0.949 | D | 0.779 | deleterious | None | None | None | None | I |
C/F | 0.4408 | ambiguous | 0.4867 | ambiguous | -1.157 | Destabilizing | 0.028 | N | 0.599 | neutral | None | None | None | None | I |
C/G | 0.3418 | ambiguous | 0.3282 | benign | -2.165 | Highly Destabilizing | 0.669 | D | 0.735 | prob.delet. | None | None | None | None | I |
C/H | 0.8398 | likely_pathogenic | 0.8608 | pathogenic | -1.981 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | I |
C/I | 0.7987 | likely_pathogenic | 0.795 | pathogenic | -0.998 | Destabilizing | 0.842 | D | 0.721 | prob.delet. | None | None | None | None | I |
C/K | 0.9812 | likely_pathogenic | 0.9835 | pathogenic | -0.836 | Destabilizing | 0.949 | D | 0.779 | deleterious | None | None | None | None | I |
C/L | 0.6967 | likely_pathogenic | 0.7104 | pathogenic | -0.998 | Destabilizing | 0.728 | D | 0.64 | neutral | None | None | None | None | I |
C/M | 0.8311 | likely_pathogenic | 0.8315 | pathogenic | 0.023 | Stabilizing | 0.991 | D | 0.711 | prob.delet. | None | None | None | None | I |
C/N | 0.7802 | likely_pathogenic | 0.7879 | pathogenic | -0.96 | Destabilizing | 0.949 | D | 0.786 | deleterious | None | None | None | None | I |
C/P | 0.997 | likely_pathogenic | 0.9974 | pathogenic | -1.255 | Destabilizing | 0.974 | D | 0.802 | deleterious | None | None | None | None | I |
C/Q | 0.8912 | likely_pathogenic | 0.9069 | pathogenic | -0.779 | Destabilizing | 0.974 | D | 0.795 | deleterious | None | None | None | None | I |
C/R | 0.8884 | likely_pathogenic | 0.8992 | pathogenic | -0.758 | Destabilizing | 0.934 | D | 0.803 | deleterious | None | None | None | None | I |
C/S | 0.3275 | likely_benign | 0.3134 | benign | -1.539 | Destabilizing | 0.051 | N | 0.509 | neutral | None | None | None | None | I |
C/T | 0.5878 | likely_pathogenic | 0.5565 | ambiguous | -1.213 | Destabilizing | 0.728 | D | 0.655 | neutral | None | None | None | None | I |
C/V | 0.6688 | likely_pathogenic | 0.6656 | pathogenic | -1.255 | Destabilizing | 0.842 | D | 0.661 | neutral | None | None | None | None | I |
C/W | 0.8456 | likely_pathogenic | 0.8567 | pathogenic | -1.121 | Destabilizing | 0.997 | D | 0.725 | prob.delet. | None | None | None | None | I |
C/Y | 0.6282 | likely_pathogenic | 0.6693 | pathogenic | -1.124 | Destabilizing | 0.876 | D | 0.738 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.