Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9579 | 28960;28961;28962 | chr2:178709584;178709583;178709582 | chr2:179574311;179574310;179574309 |
N2AB | 9262 | 28009;28010;28011 | chr2:178709584;178709583;178709582 | chr2:179574311;179574310;179574309 |
N2A | 8335 | 25228;25229;25230 | chr2:178709584;178709583;178709582 | chr2:179574311;179574310;179574309 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.988 | None | 0.765 | 0.395 | 0.45755974854 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1093 | likely_benign | 0.0865 | benign | -1.244 | Destabilizing | 0.061 | N | 0.142 | neutral | None | None | None | None | N |
S/C | 0.2532 | likely_benign | 0.2384 | benign | -0.945 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/D | 0.9904 | likely_pathogenic | 0.9884 | pathogenic | -0.639 | Destabilizing | 0.969 | D | 0.694 | prob.neutral | None | None | None | None | N |
S/E | 0.9939 | likely_pathogenic | 0.9923 | pathogenic | -0.526 | Destabilizing | 0.969 | D | 0.649 | neutral | None | None | None | None | N |
S/F | 0.9324 | likely_pathogenic | 0.8923 | pathogenic | -1.39 | Destabilizing | 0.988 | D | 0.763 | deleterious | None | None | None | None | N |
S/G | 0.3203 | likely_benign | 0.2756 | benign | -1.542 | Destabilizing | 0.863 | D | 0.602 | neutral | None | None | None | None | N |
S/H | 0.9795 | likely_pathogenic | 0.9738 | pathogenic | -1.767 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
S/I | 0.793 | likely_pathogenic | 0.7849 | pathogenic | -0.51 | Destabilizing | 0.884 | D | 0.672 | neutral | None | None | None | None | N |
S/K | 0.9988 | likely_pathogenic | 0.9984 | pathogenic | -0.277 | Destabilizing | 0.969 | D | 0.651 | neutral | None | None | None | None | N |
S/L | 0.5929 | likely_pathogenic | 0.5654 | pathogenic | -0.51 | Destabilizing | 0.759 | D | 0.648 | neutral | None | None | None | None | N |
S/M | 0.7962 | likely_pathogenic | 0.7701 | pathogenic | -0.376 | Destabilizing | 0.991 | D | 0.746 | deleterious | None | None | None | None | N |
S/N | 0.8925 | likely_pathogenic | 0.8814 | pathogenic | -0.622 | Destabilizing | 0.969 | D | 0.675 | neutral | None | None | None | None | N |
S/P | 0.9893 | likely_pathogenic | 0.9887 | pathogenic | -0.726 | Destabilizing | 0.988 | D | 0.765 | deleterious | None | None | None | None | N |
S/Q | 0.9883 | likely_pathogenic | 0.9853 | pathogenic | -0.643 | Destabilizing | 0.997 | D | 0.709 | prob.delet. | None | None | None | None | N |
S/R | 0.9966 | likely_pathogenic | 0.9954 | pathogenic | -0.405 | Destabilizing | 0.991 | D | 0.772 | deleterious | None | None | None | None | N |
S/T | 0.1666 | likely_benign | 0.172 | benign | -0.612 | Destabilizing | 0.134 | N | 0.166 | neutral | None | None | None | None | N |
S/V | 0.5876 | likely_pathogenic | 0.5695 | pathogenic | -0.726 | Destabilizing | 0.079 | N | 0.424 | neutral | None | None | None | None | N |
S/W | 0.9803 | likely_pathogenic | 0.9703 | pathogenic | -1.328 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
S/Y | 0.9379 | likely_pathogenic | 0.9006 | pathogenic | -1.01 | Destabilizing | 0.996 | D | 0.768 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.