Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 958 | 3097;3098;3099 | chr2:178783034;178783033;178783032 | chr2:179647761;179647760;179647759 |
N2AB | 958 | 3097;3098;3099 | chr2:178783034;178783033;178783032 | chr2:179647761;179647760;179647759 |
N2A | 958 | 3097;3098;3099 | chr2:178783034;178783033;178783032 | chr2:179647761;179647760;179647759 |
N2B | 912 | 2959;2960;2961 | chr2:178783034;178783033;178783032 | chr2:179647761;179647760;179647759 |
Novex-1 | 912 | 2959;2960;2961 | chr2:178783034;178783033;178783032 | chr2:179647761;179647760;179647759 |
Novex-2 | 912 | 2959;2960;2961 | chr2:178783034;178783033;178783032 | chr2:179647761;179647760;179647759 |
Novex-3 | 958 | 3097;3098;3099 | chr2:178783034;178783033;178783032 | chr2:179647761;179647760;179647759 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.413 | 0.368 | 0.315903272564 | gnomAD-4.0.0 | 1.20037E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31256E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.523 | ambiguous | 0.5897 | pathogenic | -0.606 | Destabilizing | 0.999 | D | 0.592 | neutral | N | 0.520170505 | None | None | N |
E/C | 0.9901 | likely_pathogenic | 0.9918 | pathogenic | -0.153 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/D | 0.4275 | ambiguous | 0.4614 | ambiguous | -0.538 | Destabilizing | 0.999 | D | 0.413 | neutral | N | 0.499633631 | None | None | N |
E/F | 0.9836 | likely_pathogenic | 0.9866 | pathogenic | -0.305 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/G | 0.5619 | ambiguous | 0.6153 | pathogenic | -0.85 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.510911998 | None | None | N |
E/H | 0.909 | likely_pathogenic | 0.9269 | pathogenic | -0.187 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
E/I | 0.9345 | likely_pathogenic | 0.9516 | pathogenic | 0.023 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/K | 0.4741 | ambiguous | 0.5561 | ambiguous | 0.209 | Stabilizing | 0.999 | D | 0.537 | neutral | D | 0.524110528 | None | None | N |
E/L | 0.9237 | likely_pathogenic | 0.9422 | pathogenic | 0.023 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/M | 0.8867 | likely_pathogenic | 0.9116 | pathogenic | 0.213 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
E/N | 0.654 | likely_pathogenic | 0.7069 | pathogenic | -0.291 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/P | 0.9981 | likely_pathogenic | 0.9985 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
E/Q | 0.297 | likely_benign | 0.3417 | ambiguous | -0.227 | Destabilizing | 1.0 | D | 0.601 | neutral | N | 0.491746322 | None | None | N |
E/R | 0.6871 | likely_pathogenic | 0.7492 | pathogenic | 0.431 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/S | 0.5457 | ambiguous | 0.6029 | pathogenic | -0.442 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | N |
E/T | 0.7328 | likely_pathogenic | 0.7904 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
E/V | 0.8084 | likely_pathogenic | 0.85 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | D | 0.611169683 | None | None | N |
E/W | 0.9967 | likely_pathogenic | 0.9973 | pathogenic | -0.067 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/Y | 0.9696 | likely_pathogenic | 0.9758 | pathogenic | -0.039 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.