Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 959 | 3100;3101;3102 | chr2:178783031;178783030;178783029 | chr2:179647758;179647757;179647756 |
N2AB | 959 | 3100;3101;3102 | chr2:178783031;178783030;178783029 | chr2:179647758;179647757;179647756 |
N2A | 959 | 3100;3101;3102 | chr2:178783031;178783030;178783029 | chr2:179647758;179647757;179647756 |
N2B | 913 | 2962;2963;2964 | chr2:178783031;178783030;178783029 | chr2:179647758;179647757;179647756 |
Novex-1 | 913 | 2962;2963;2964 | chr2:178783031;178783030;178783029 | chr2:179647758;179647757;179647756 |
Novex-2 | 913 | 2962;2963;2964 | chr2:178783031;178783030;178783029 | chr2:179647758;179647757;179647756 |
Novex-3 | 959 | 3100;3101;3102 | chr2:178783031;178783030;178783029 | chr2:179647758;179647757;179647756 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 1.0 | D | 0.861 | 0.505 | 0.673716824456 | gnomAD-4.0.0 | 1.59062E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8567E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1278 | likely_benign | 0.1412 | benign | -0.416 | Destabilizing | 0.997 | D | 0.443 | neutral | N | 0.485036258 | None | None | N |
S/C | 0.3917 | ambiguous | 0.4358 | ambiguous | -0.326 | Destabilizing | 1.0 | D | 0.785 | deleterious | D | 0.522536008 | None | None | N |
S/D | 0.737 | likely_pathogenic | 0.827 | pathogenic | 0.035 | Stabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
S/E | 0.8012 | likely_pathogenic | 0.8724 | pathogenic | -0.024 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
S/F | 0.6092 | likely_pathogenic | 0.7026 | pathogenic | -0.776 | Destabilizing | 1.0 | D | 0.859 | deleterious | N | 0.518616875 | None | None | N |
S/G | 0.2431 | likely_benign | 0.291 | benign | -0.598 | Destabilizing | 0.999 | D | 0.487 | neutral | None | None | None | None | N |
S/H | 0.7131 | likely_pathogenic | 0.7817 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
S/I | 0.5319 | ambiguous | 0.6341 | pathogenic | -0.058 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
S/K | 0.9082 | likely_pathogenic | 0.9484 | pathogenic | -0.619 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
S/L | 0.3041 | likely_benign | 0.3864 | ambiguous | -0.058 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
S/M | 0.4047 | ambiguous | 0.47 | ambiguous | 0.16 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
S/N | 0.2968 | likely_benign | 0.3778 | ambiguous | -0.402 | Destabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | N |
S/P | 0.4251 | ambiguous | 0.5341 | ambiguous | -0.144 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.446240953 | None | None | N |
S/Q | 0.7757 | likely_pathogenic | 0.8397 | pathogenic | -0.614 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
S/R | 0.8691 | likely_pathogenic | 0.9251 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
S/T | 0.1436 | likely_benign | 0.1722 | benign | -0.469 | Destabilizing | 0.999 | D | 0.448 | neutral | N | 0.472262155 | None | None | N |
S/V | 0.4856 | ambiguous | 0.5676 | pathogenic | -0.144 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
S/W | 0.7341 | likely_pathogenic | 0.8072 | pathogenic | -0.771 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
S/Y | 0.5272 | ambiguous | 0.6164 | pathogenic | -0.506 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.571370817 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.