Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9591 | 28996;28997;28998 | chr2:178707796;178707795;178707794 | chr2:179572523;179572522;179572521 |
N2AB | 9274 | 28045;28046;28047 | chr2:178707796;178707795;178707794 | chr2:179572523;179572522;179572521 |
N2A | 8347 | 25264;25265;25266 | chr2:178707796;178707795;178707794 | chr2:179572523;179572522;179572521 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.98 | None | 0.405 | 0.179 | 0.615206833243 | gnomAD-4.0.0 | 1.64259E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.96873E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1536 | likely_benign | 0.1271 | benign | -1.073 | Destabilizing | 0.835 | D | 0.388 | neutral | None | None | None | None | N |
V/C | 0.706 | likely_pathogenic | 0.6642 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.529 | neutral | None | None | None | None | N |
V/D | 0.4166 | ambiguous | 0.3106 | benign | -0.811 | Destabilizing | 0.983 | D | 0.485 | neutral | None | None | None | None | N |
V/E | 0.242 | likely_benign | 0.1978 | benign | -0.842 | Destabilizing | 0.961 | D | 0.441 | neutral | None | None | None | None | N |
V/F | 0.1741 | likely_benign | 0.1327 | benign | -0.876 | Destabilizing | 0.999 | D | 0.489 | neutral | None | None | None | None | N |
V/G | 0.2263 | likely_benign | 0.18 | benign | -1.342 | Destabilizing | 0.961 | D | 0.465 | neutral | None | None | None | None | N |
V/H | 0.4263 | ambiguous | 0.3625 | ambiguous | -0.816 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
V/I | 0.0805 | likely_benign | 0.0768 | benign | -0.46 | Destabilizing | 0.98 | D | 0.405 | neutral | None | None | None | None | N |
V/K | 0.2108 | likely_benign | 0.1867 | benign | -0.916 | Destabilizing | 0.991 | D | 0.44 | neutral | None | None | None | None | N |
V/L | 0.1539 | likely_benign | 0.124 | benign | -0.46 | Destabilizing | 0.954 | D | 0.419 | neutral | None | None | None | None | N |
V/M | 0.1176 | likely_benign | 0.1 | benign | -0.403 | Destabilizing | 0.999 | D | 0.46 | neutral | None | None | None | None | N |
V/N | 0.2318 | likely_benign | 0.194 | benign | -0.691 | Destabilizing | 0.503 | D | 0.35 | neutral | None | None | None | None | N |
V/P | 0.9355 | likely_pathogenic | 0.8889 | pathogenic | -0.628 | Destabilizing | 0.996 | D | 0.574 | neutral | None | None | None | None | N |
V/Q | 0.2045 | likely_benign | 0.1786 | benign | -0.869 | Destabilizing | 0.996 | D | 0.566 | neutral | None | None | None | None | N |
V/R | 0.1841 | likely_benign | 0.1548 | benign | -0.382 | Destabilizing | 0.996 | D | 0.609 | neutral | None | None | None | None | N |
V/S | 0.1649 | likely_benign | 0.1416 | benign | -1.159 | Destabilizing | 0.559 | D | 0.301 | neutral | None | None | None | None | N |
V/T | 0.1508 | likely_benign | 0.1279 | benign | -1.077 | Destabilizing | 0.942 | D | 0.378 | neutral | None | None | None | None | N |
V/W | 0.8226 | likely_pathogenic | 0.7357 | pathogenic | -1.03 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/Y | 0.5105 | ambiguous | 0.448 | ambiguous | -0.733 | Destabilizing | 0.999 | D | 0.491 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.