Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9593 | 29002;29003;29004 | chr2:178707790;178707789;178707788 | chr2:179572517;179572516;179572515 |
N2AB | 9276 | 28051;28052;28053 | chr2:178707790;178707789;178707788 | chr2:179572517;179572516;179572515 |
N2A | 8349 | 25270;25271;25272 | chr2:178707790;178707789;178707788 | chr2:179572517;179572516;179572515 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 1.0 | None | 0.383 | 0.174 | 0.159798565429 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/N | None | None | 1.0 | None | 0.635 | 0.287 | 0.177238962908 | gnomAD-4.0.0 | 1.38024E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.8132E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4392 | ambiguous | 0.335 | benign | -0.62 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
D/C | 0.8799 | likely_pathogenic | 0.8247 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
D/E | 0.366 | ambiguous | 0.3092 | benign | -0.771 | Destabilizing | 1.0 | D | 0.383 | neutral | None | None | None | None | N |
D/F | 0.8003 | likely_pathogenic | 0.7081 | pathogenic | -0.399 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
D/G | 0.4135 | ambiguous | 0.3154 | benign | -0.937 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
D/H | 0.4705 | ambiguous | 0.3779 | ambiguous | -0.849 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
D/I | 0.5941 | likely_pathogenic | 0.4753 | ambiguous | 0.211 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
D/K | 0.6713 | likely_pathogenic | 0.5907 | pathogenic | -1.114 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
D/L | 0.5755 | likely_pathogenic | 0.4806 | ambiguous | 0.211 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
D/M | 0.8563 | likely_pathogenic | 0.79 | pathogenic | 0.63 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
D/N | 0.1593 | likely_benign | 0.1274 | benign | -1.227 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
D/P | 0.925 | likely_pathogenic | 0.9162 | pathogenic | -0.043 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
D/Q | 0.5862 | likely_pathogenic | 0.5013 | ambiguous | -1.079 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
D/R | 0.6442 | likely_pathogenic | 0.5565 | ambiguous | -0.902 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
D/S | 0.2052 | likely_benign | 0.1623 | benign | -1.494 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
D/T | 0.4307 | ambiguous | 0.3484 | ambiguous | -1.262 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
D/V | 0.4179 | ambiguous | 0.3097 | benign | -0.043 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
D/W | 0.9594 | likely_pathogenic | 0.9417 | pathogenic | -0.362 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
D/Y | 0.4325 | ambiguous | 0.3436 | ambiguous | -0.277 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.