Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC959329002;29003;29004 chr2:178707790;178707789;178707788chr2:179572517;179572516;179572515
N2AB927628051;28052;28053 chr2:178707790;178707789;178707788chr2:179572517;179572516;179572515
N2A834925270;25271;25272 chr2:178707790;178707789;178707788chr2:179572517;179572516;179572515
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: D
  • RefSeq wild type transcript codon: GAT
  • RefSeq wild type template codon: CTA
  • Domain: Ig-82
  • Domain position: 4
  • Structural Position: 4
  • Q(SASA): 0.5132
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
D/E None None 1.0 None 0.383 0.174 0.159798565429 gnomAD-4.0.0 1.20032E-06 None None None None N None 0 0 None 0 0 None 0 0 1.3125E-06 0 0
D/N None None 1.0 None 0.635 0.287 0.177238962908 gnomAD-4.0.0 1.38024E-06 None None None None N None 0 0 None 0 0 None 0 0 1.8132E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
D/A 0.4392 ambiguous 0.335 benign -0.62 Destabilizing 1.0 D 0.751 deleterious None None None None N
D/C 0.8799 likely_pathogenic 0.8247 pathogenic -0.476 Destabilizing 1.0 D 0.748 deleterious None None None None N
D/E 0.366 ambiguous 0.3092 benign -0.771 Destabilizing 1.0 D 0.383 neutral None None None None N
D/F 0.8003 likely_pathogenic 0.7081 pathogenic -0.399 Destabilizing 1.0 D 0.757 deleterious None None None None N
D/G 0.4135 ambiguous 0.3154 benign -0.937 Destabilizing 1.0 D 0.739 prob.delet. None None None None N
D/H 0.4705 ambiguous 0.3779 ambiguous -0.849 Destabilizing 1.0 D 0.681 prob.neutral None None None None N
D/I 0.5941 likely_pathogenic 0.4753 ambiguous 0.211 Stabilizing 1.0 D 0.771 deleterious None None None None N
D/K 0.6713 likely_pathogenic 0.5907 pathogenic -1.114 Destabilizing 1.0 D 0.735 prob.delet. None None None None N
D/L 0.5755 likely_pathogenic 0.4806 ambiguous 0.211 Stabilizing 1.0 D 0.781 deleterious None None None None N
D/M 0.8563 likely_pathogenic 0.79 pathogenic 0.63 Stabilizing 1.0 D 0.738 prob.delet. None None None None N
D/N 0.1593 likely_benign 0.1274 benign -1.227 Destabilizing 1.0 D 0.635 neutral None None None None N
D/P 0.925 likely_pathogenic 0.9162 pathogenic -0.043 Destabilizing 1.0 D 0.725 prob.delet. None None None None N
D/Q 0.5862 likely_pathogenic 0.5013 ambiguous -1.079 Destabilizing 1.0 D 0.704 prob.neutral None None None None N
D/R 0.6442 likely_pathogenic 0.5565 ambiguous -0.902 Destabilizing 1.0 D 0.765 deleterious None None None None N
D/S 0.2052 likely_benign 0.1623 benign -1.494 Destabilizing 1.0 D 0.695 prob.neutral None None None None N
D/T 0.4307 ambiguous 0.3484 ambiguous -1.262 Destabilizing 1.0 D 0.74 deleterious None None None None N
D/V 0.4179 ambiguous 0.3097 benign -0.043 Destabilizing 1.0 D 0.777 deleterious None None None None N
D/W 0.9594 likely_pathogenic 0.9417 pathogenic -0.362 Destabilizing 1.0 D 0.751 deleterious None None None None N
D/Y 0.4325 ambiguous 0.3436 ambiguous -0.277 Destabilizing 1.0 D 0.747 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.