Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9596 | 29011;29012;29013 | chr2:178707781;178707780;178707779 | chr2:179572508;179572507;179572506 |
N2AB | 9279 | 28060;28061;28062 | chr2:178707781;178707780;178707779 | chr2:179572508;179572507;179572506 |
N2A | 8352 | 25279;25280;25281 | chr2:178707781;178707780;178707779 | chr2:179572508;179572507;179572506 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs2076095126 | None | 0.971 | None | 0.646 | 0.245 | 0.383256108077 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/F | rs2076095126 | None | 0.971 | None | 0.646 | 0.245 | 0.383256108077 | gnomAD-4.0.0 | 6.44154E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20583E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7341 | likely_pathogenic | 0.7471 | pathogenic | -2.094 | Highly Destabilizing | 0.754 | D | 0.562 | neutral | None | None | None | None | N |
L/C | 0.8423 | likely_pathogenic | 0.8618 | pathogenic | -1.362 | Destabilizing | 0.998 | D | 0.716 | prob.delet. | None | None | None | None | N |
L/D | 0.9911 | likely_pathogenic | 0.9915 | pathogenic | -1.549 | Destabilizing | 0.956 | D | 0.789 | deleterious | None | None | None | None | N |
L/E | 0.9536 | likely_pathogenic | 0.9553 | pathogenic | -1.441 | Destabilizing | 0.956 | D | 0.811 | deleterious | None | None | None | None | N |
L/F | 0.5527 | ambiguous | 0.5325 | ambiguous | -1.323 | Destabilizing | 0.971 | D | 0.646 | neutral | None | None | None | None | N |
L/G | 0.9199 | likely_pathogenic | 0.9189 | pathogenic | -2.534 | Highly Destabilizing | 0.956 | D | 0.801 | deleterious | None | None | None | None | N |
L/H | 0.9171 | likely_pathogenic | 0.922 | pathogenic | -1.816 | Destabilizing | 0.997 | D | 0.794 | deleterious | None | None | None | None | N |
L/I | 0.171 | likely_benign | 0.166 | benign | -0.89 | Destabilizing | 0.698 | D | 0.501 | neutral | None | None | None | None | N |
L/K | 0.9421 | likely_pathogenic | 0.9535 | pathogenic | -1.29 | Destabilizing | 0.956 | D | 0.736 | prob.delet. | None | None | None | None | N |
L/M | 0.2432 | likely_benign | 0.2431 | benign | -0.775 | Destabilizing | 0.978 | D | 0.648 | neutral | None | None | None | None | N |
L/N | 0.9465 | likely_pathogenic | 0.9538 | pathogenic | -1.26 | Destabilizing | 0.978 | D | 0.814 | deleterious | None | None | None | None | N |
L/P | 0.5509 | ambiguous | 0.6325 | pathogenic | -1.265 | Destabilizing | 0.032 | N | 0.585 | neutral | None | None | None | None | N |
L/Q | 0.8276 | likely_pathogenic | 0.835 | pathogenic | -1.304 | Destabilizing | 0.978 | D | 0.747 | deleterious | None | None | None | None | N |
L/R | 0.8963 | likely_pathogenic | 0.9021 | pathogenic | -0.904 | Destabilizing | 0.971 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/S | 0.905 | likely_pathogenic | 0.9036 | pathogenic | -2.029 | Highly Destabilizing | 0.956 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/T | 0.7667 | likely_pathogenic | 0.7803 | pathogenic | -1.788 | Destabilizing | 0.956 | D | 0.702 | prob.neutral | None | None | None | None | N |
L/V | 0.1992 | likely_benign | 0.1956 | benign | -1.265 | Destabilizing | 0.058 | N | 0.393 | neutral | None | None | None | None | N |
L/W | 0.9044 | likely_pathogenic | 0.9006 | pathogenic | -1.499 | Destabilizing | 0.998 | D | 0.72 | prob.delet. | None | None | None | None | N |
L/Y | 0.9482 | likely_pathogenic | 0.9468 | pathogenic | -1.242 | Destabilizing | 0.993 | D | 0.724 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.