Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 960 | 3103;3104;3105 | chr2:178783028;178783027;178783026 | chr2:179647755;179647754;179647753 |
N2AB | 960 | 3103;3104;3105 | chr2:178783028;178783027;178783026 | chr2:179647755;179647754;179647753 |
N2A | 960 | 3103;3104;3105 | chr2:178783028;178783027;178783026 | chr2:179647755;179647754;179647753 |
N2B | 914 | 2965;2966;2967 | chr2:178783028;178783027;178783026 | chr2:179647755;179647754;179647753 |
Novex-1 | 914 | 2965;2966;2967 | chr2:178783028;178783027;178783026 | chr2:179647755;179647754;179647753 |
Novex-2 | 914 | 2965;2966;2967 | chr2:178783028;178783027;178783026 | chr2:179647755;179647754;179647753 |
Novex-3 | 960 | 3103;3104;3105 | chr2:178783028;178783027;178783026 | chr2:179647755;179647754;179647753 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.046 | D | 0.243 | 0.256 | 0.493628743246 | gnomAD-4.0.0 | 1.36821E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79868E-06 | 0 | 0 |
V/L | None | None | 0.046 | N | 0.242 | 0.357 | 0.411001663086 | gnomAD-4.0.0 | 6.84104E-07 | None | None | None | None | N | None | 2.98704E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7364 | likely_pathogenic | 0.7337 | pathogenic | -1.572 | Destabilizing | 0.939 | D | 0.533 | neutral | D | 0.523340756 | None | None | N |
V/C | 0.9716 | likely_pathogenic | 0.9723 | pathogenic | -1.434 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | None | None | None | None | N |
V/D | 0.9963 | likely_pathogenic | 0.9969 | pathogenic | -0.986 | Destabilizing | 0.997 | D | 0.792 | deleterious | D | 0.791481458 | None | None | N |
V/E | 0.9815 | likely_pathogenic | 0.9846 | pathogenic | -0.933 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
V/F | 0.8797 | likely_pathogenic | 0.8989 | pathogenic | -1.119 | Destabilizing | 0.982 | D | 0.765 | deleterious | D | 0.630505523 | None | None | N |
V/G | 0.9461 | likely_pathogenic | 0.9498 | pathogenic | -1.952 | Destabilizing | 0.997 | D | 0.798 | deleterious | D | 0.663453342 | None | None | N |
V/H | 0.9966 | likely_pathogenic | 0.9972 | pathogenic | -1.426 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
V/I | 0.1484 | likely_benign | 0.1536 | benign | -0.611 | Destabilizing | 0.046 | N | 0.243 | neutral | D | 0.529530056 | None | None | N |
V/K | 0.9816 | likely_pathogenic | 0.985 | pathogenic | -1.289 | Destabilizing | 0.993 | D | 0.761 | deleterious | None | None | None | None | N |
V/L | 0.8142 | likely_pathogenic | 0.8358 | pathogenic | -0.611 | Destabilizing | 0.046 | N | 0.242 | neutral | N | 0.518464429 | None | None | N |
V/M | 0.7297 | likely_pathogenic | 0.7604 | pathogenic | -0.66 | Destabilizing | 0.986 | D | 0.648 | neutral | None | None | None | None | N |
V/N | 0.9899 | likely_pathogenic | 0.9919 | pathogenic | -1.199 | Destabilizing | 0.998 | D | 0.808 | deleterious | None | None | None | None | N |
V/P | 0.9981 | likely_pathogenic | 0.9984 | pathogenic | -0.896 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/Q | 0.9778 | likely_pathogenic | 0.9819 | pathogenic | -1.251 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
V/R | 0.9736 | likely_pathogenic | 0.9784 | pathogenic | -0.902 | Destabilizing | 0.998 | D | 0.808 | deleterious | None | None | None | None | N |
V/S | 0.9502 | likely_pathogenic | 0.9524 | pathogenic | -1.873 | Destabilizing | 0.993 | D | 0.757 | deleterious | None | None | None | None | N |
V/T | 0.8177 | likely_pathogenic | 0.8215 | pathogenic | -1.677 | Destabilizing | 0.953 | D | 0.613 | neutral | None | None | None | None | N |
V/W | 0.9988 | likely_pathogenic | 0.999 | pathogenic | -1.286 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/Y | 0.9919 | likely_pathogenic | 0.9934 | pathogenic | -0.986 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.