Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9603 | 29032;29033;29034 | chr2:178707760;178707759;178707758 | chr2:179572487;179572486;179572485 |
N2AB | 9286 | 28081;28082;28083 | chr2:178707760;178707759;178707758 | chr2:179572487;179572486;179572485 |
N2A | 8359 | 25300;25301;25302 | chr2:178707760;178707759;178707758 | chr2:179572487;179572486;179572485 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.999 | None | 0.646 | 0.32 | 0.346085882481 | gnomAD-4.0.0 | 1.59134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77269E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1571 | likely_benign | 0.1392 | benign | -0.716 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | N |
E/C | 0.9236 | likely_pathogenic | 0.9004 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
E/D | 0.2074 | likely_benign | 0.2046 | benign | -0.601 | Destabilizing | 0.434 | N | 0.269 | neutral | None | None | None | None | N |
E/F | 0.8683 | likely_pathogenic | 0.8131 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/G | 0.2343 | likely_benign | 0.1916 | benign | -0.978 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
E/H | 0.6182 | likely_pathogenic | 0.5504 | ambiguous | -0.37 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/I | 0.4813 | ambiguous | 0.4015 | ambiguous | -0.033 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/K | 0.1816 | likely_benign | 0.1407 | benign | 0.096 | Stabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | N |
E/L | 0.5176 | ambiguous | 0.4252 | ambiguous | -0.033 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/M | 0.5938 | likely_pathogenic | 0.5005 | ambiguous | 0.245 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/N | 0.3881 | ambiguous | 0.3492 | ambiguous | -0.373 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/P | 0.5074 | ambiguous | 0.5106 | ambiguous | -0.241 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
E/Q | 0.181 | likely_benign | 0.1513 | benign | -0.312 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
E/R | 0.3372 | likely_benign | 0.2631 | benign | 0.313 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/S | 0.2504 | likely_benign | 0.2248 | benign | -0.561 | Destabilizing | 0.997 | D | 0.614 | neutral | None | None | None | None | N |
E/T | 0.3037 | likely_benign | 0.2604 | benign | -0.34 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
E/V | 0.2842 | likely_benign | 0.2294 | benign | -0.241 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/W | 0.9597 | likely_pathogenic | 0.932 | pathogenic | -0.147 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
E/Y | 0.7952 | likely_pathogenic | 0.729 | pathogenic | -0.131 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.