Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9610 | 29053;29054;29055 | chr2:178707739;178707738;178707737 | chr2:179572466;179572465;179572464 |
N2AB | 9293 | 28102;28103;28104 | chr2:178707739;178707738;178707737 | chr2:179572466;179572465;179572464 |
N2A | 8366 | 25321;25322;25323 | chr2:178707739;178707738;178707737 | chr2:179572466;179572465;179572464 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs371759532 | -0.597 | 0.062 | None | 0.455 | 0.09 | None | gnomAD-2.1.1 | 7.49E-05 | None | None | None | None | N | None | 8.67912E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/N | rs371759532 | -0.597 | 0.062 | None | 0.455 | 0.09 | None | gnomAD-3.1.2 | 1.97055E-04 | None | None | None | None | N | None | 7.2338E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/N | rs371759532 | -0.597 | 0.062 | None | 0.455 | 0.09 | None | gnomAD-4.0.0 | 3.408E-05 | None | None | None | None | N | None | 7.20519E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60108E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0921 | likely_benign | 0.0926 | benign | -0.768 | Destabilizing | 0.035 | N | 0.437 | neutral | None | None | None | None | N |
S/C | 0.1559 | likely_benign | 0.1759 | benign | -0.557 | Destabilizing | 0.78 | D | 0.541 | neutral | None | None | None | None | N |
S/D | 0.4601 | ambiguous | 0.4863 | ambiguous | -0.611 | Destabilizing | 0.149 | N | 0.426 | neutral | None | None | None | None | N |
S/E | 0.5112 | ambiguous | 0.5745 | pathogenic | -0.557 | Destabilizing | 0.149 | N | 0.444 | neutral | None | None | None | None | N |
S/F | 0.1958 | likely_benign | 0.1897 | benign | -0.771 | Destabilizing | 0.38 | N | 0.593 | neutral | None | None | None | None | N |
S/G | 0.1076 | likely_benign | 0.1033 | benign | -1.08 | Destabilizing | None | N | 0.23 | neutral | None | None | None | None | N |
S/H | 0.2662 | likely_benign | 0.3031 | benign | -1.559 | Destabilizing | 0.001 | N | 0.409 | neutral | None | None | None | None | N |
S/I | 0.1594 | likely_benign | 0.1697 | benign | -0.029 | Destabilizing | 0.188 | N | 0.585 | neutral | None | None | None | None | N |
S/K | 0.4988 | ambiguous | 0.588 | pathogenic | -0.705 | Destabilizing | 0.002 | N | 0.323 | neutral | None | None | None | None | N |
S/L | 0.1284 | likely_benign | 0.1193 | benign | -0.029 | Destabilizing | 0.081 | N | 0.511 | neutral | None | None | None | None | N |
S/M | 0.2522 | likely_benign | 0.2619 | benign | 0.126 | Stabilizing | 0.824 | D | 0.532 | neutral | None | None | None | None | N |
S/N | 0.1485 | likely_benign | 0.1594 | benign | -0.833 | Destabilizing | 0.062 | N | 0.455 | neutral | None | None | None | None | N |
S/P | 0.6614 | likely_pathogenic | 0.5864 | pathogenic | -0.24 | Destabilizing | 0.555 | D | 0.558 | neutral | None | None | None | None | N |
S/Q | 0.4136 | ambiguous | 0.4699 | ambiguous | -0.872 | Destabilizing | 0.38 | N | 0.497 | neutral | None | None | None | None | N |
S/R | 0.3737 | ambiguous | 0.429 | ambiguous | -0.733 | Destabilizing | 0.001 | N | 0.356 | neutral | None | None | None | None | N |
S/T | 0.0838 | likely_benign | 0.0904 | benign | -0.741 | Destabilizing | None | N | 0.338 | neutral | None | None | None | None | N |
S/V | 0.1888 | likely_benign | 0.2018 | benign | -0.24 | Destabilizing | 0.081 | N | 0.558 | neutral | None | None | None | None | N |
S/W | 0.3983 | ambiguous | 0.3755 | ambiguous | -0.816 | Destabilizing | 0.935 | D | 0.632 | neutral | None | None | None | None | N |
S/Y | 0.1998 | likely_benign | 0.1986 | benign | -0.513 | Destabilizing | 0.235 | N | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.