Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9613 | 29062;29063;29064 | chr2:178707730;178707729;178707728 | chr2:179572457;179572456;179572455 |
N2AB | 9296 | 28111;28112;28113 | chr2:178707730;178707729;178707728 | chr2:179572457;179572456;179572455 |
N2A | 8369 | 25330;25331;25332 | chr2:178707730;178707729;178707728 | chr2:179572457;179572456;179572455 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs749649816 | -0.581 | 0.543 | None | 0.263 | 0.218 | 0.389439708392 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
V/I | rs749649816 | -0.581 | 0.543 | None | 0.263 | 0.218 | 0.389439708392 | gnomAD-4.0.0 | 1.59106E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85791E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6472 | likely_pathogenic | 0.5829 | pathogenic | -2.13 | Highly Destabilizing | 0.989 | D | 0.66 | neutral | None | None | None | None | N |
V/C | 0.9238 | likely_pathogenic | 0.9184 | pathogenic | -1.659 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
V/D | 0.9963 | likely_pathogenic | 0.9946 | pathogenic | -3.087 | Highly Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
V/E | 0.9827 | likely_pathogenic | 0.9781 | pathogenic | -2.843 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/F | 0.6652 | likely_pathogenic | 0.5502 | ambiguous | -1.206 | Destabilizing | 0.998 | D | 0.788 | deleterious | None | None | None | None | N |
V/G | 0.8465 | likely_pathogenic | 0.8177 | pathogenic | -2.672 | Highly Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
V/H | 0.992 | likely_pathogenic | 0.988 | pathogenic | -2.577 | Highly Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/I | 0.1153 | likely_benign | 0.1037 | benign | -0.587 | Destabilizing | 0.543 | D | 0.263 | neutral | None | None | None | None | N |
V/K | 0.9807 | likely_pathogenic | 0.9773 | pathogenic | -1.714 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
V/L | 0.4903 | ambiguous | 0.4545 | ambiguous | -0.587 | Destabilizing | 0.948 | D | 0.457 | neutral | None | None | None | None | N |
V/M | 0.4826 | ambiguous | 0.4106 | ambiguous | -0.713 | Destabilizing | 0.96 | D | 0.519 | neutral | None | None | None | None | N |
V/N | 0.9859 | likely_pathogenic | 0.98 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/P | 0.9871 | likely_pathogenic | 0.9849 | pathogenic | -1.079 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/Q | 0.9699 | likely_pathogenic | 0.9622 | pathogenic | -1.935 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
V/R | 0.9606 | likely_pathogenic | 0.9548 | pathogenic | -1.635 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
V/S | 0.8899 | likely_pathogenic | 0.8435 | pathogenic | -2.688 | Highly Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
V/T | 0.7617 | likely_pathogenic | 0.7095 | pathogenic | -2.309 | Highly Destabilizing | 0.996 | D | 0.682 | prob.neutral | None | None | None | None | N |
V/W | 0.9927 | likely_pathogenic | 0.9878 | pathogenic | -1.857 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/Y | 0.966 | likely_pathogenic | 0.9508 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.