Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9614 | 29065;29066;29067 | chr2:178707727;178707726;178707725 | chr2:179572454;179572453;179572452 |
N2AB | 9297 | 28114;28115;28116 | chr2:178707727;178707726;178707725 | chr2:179572454;179572453;179572452 |
N2A | 8370 | 25333;25334;25335 | chr2:178707727;178707726;178707725 | chr2:179572454;179572453;179572452 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.003 | None | 0.107 | 0.097 | 0.0920862733494 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.193 | likely_benign | 0.1571 | benign | -0.369 | Destabilizing | 0.002 | N | 0.144 | neutral | None | None | None | None | I |
Q/C | 0.4549 | ambiguous | 0.3564 | ambiguous | 0.218 | Stabilizing | None | N | 0.225 | neutral | None | None | None | None | I |
Q/D | 0.4307 | ambiguous | 0.324 | benign | -0.16 | Destabilizing | 0.009 | N | 0.176 | neutral | None | None | None | None | I |
Q/E | 0.0998 | likely_benign | 0.0885 | benign | -0.155 | Destabilizing | None | N | 0.037 | neutral | None | None | None | None | I |
Q/F | 0.49 | ambiguous | 0.4058 | ambiguous | -0.361 | Destabilizing | 0.022 | N | 0.455 | neutral | None | None | None | None | I |
Q/G | 0.2423 | likely_benign | 0.1761 | benign | -0.624 | Destabilizing | 0.008 | N | 0.198 | neutral | None | None | None | None | I |
Q/H | 0.1511 | likely_benign | 0.1185 | benign | -0.546 | Destabilizing | None | N | 0.071 | neutral | None | None | None | None | I |
Q/I | 0.2863 | likely_benign | 0.2607 | benign | 0.236 | Stabilizing | 0.085 | N | 0.414 | neutral | None | None | None | None | I |
Q/K | 0.0842 | likely_benign | 0.079 | benign | -0.156 | Destabilizing | 0.003 | N | 0.107 | neutral | None | None | None | None | I |
Q/L | 0.1235 | likely_benign | 0.0996 | benign | 0.236 | Stabilizing | 0.003 | N | 0.215 | neutral | None | None | None | None | I |
Q/M | 0.3106 | likely_benign | 0.2785 | benign | 0.594 | Stabilizing | 0.497 | N | 0.231 | neutral | None | None | None | None | I |
Q/N | 0.2872 | likely_benign | 0.2348 | benign | -0.469 | Destabilizing | 0.009 | N | 0.183 | neutral | None | None | None | None | I |
Q/P | 0.5622 | ambiguous | 0.4118 | ambiguous | 0.064 | Stabilizing | 0.065 | N | 0.309 | neutral | None | None | None | None | I |
Q/R | 0.0738 | likely_benign | 0.0637 | benign | -0.009 | Destabilizing | None | N | 0.033 | neutral | None | None | None | None | I |
Q/S | 0.1965 | likely_benign | 0.1762 | benign | -0.488 | Destabilizing | None | N | 0.036 | neutral | None | None | None | None | I |
Q/T | 0.1609 | likely_benign | 0.1486 | benign | -0.317 | Destabilizing | 0.009 | N | 0.211 | neutral | None | None | None | None | I |
Q/V | 0.2045 | likely_benign | 0.1805 | benign | 0.064 | Stabilizing | 0.018 | N | 0.245 | neutral | None | None | None | None | I |
Q/W | 0.2993 | likely_benign | 0.1976 | benign | -0.299 | Destabilizing | None | N | 0.205 | neutral | None | None | None | None | I |
Q/Y | 0.3354 | likely_benign | 0.2531 | benign | -0.082 | Destabilizing | 0.022 | N | 0.311 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.