Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 962 | 3109;3110;3111 | chr2:178783022;178783021;178783020 | chr2:179647749;179647748;179647747 |
N2AB | 962 | 3109;3110;3111 | chr2:178783022;178783021;178783020 | chr2:179647749;179647748;179647747 |
N2A | 962 | 3109;3110;3111 | chr2:178783022;178783021;178783020 | chr2:179647749;179647748;179647747 |
N2B | 916 | 2971;2972;2973 | chr2:178783022;178783021;178783020 | chr2:179647749;179647748;179647747 |
Novex-1 | 916 | 2971;2972;2973 | chr2:178783022;178783021;178783020 | chr2:179647749;179647748;179647747 |
Novex-2 | 916 | 2971;2972;2973 | chr2:178783022;178783021;178783020 | chr2:179647749;179647748;179647747 |
Novex-3 | 962 | 3109;3110;3111 | chr2:178783022;178783021;178783020 | chr2:179647749;179647748;179647747 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/W | None | None | 0.997 | D | 0.808 | 0.754 | 0.92973120882 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9853 | likely_pathogenic | 0.9856 | pathogenic | -2.589 | Highly Destabilizing | 0.86 | D | 0.692 | prob.neutral | None | None | None | None | N |
L/C | 0.9921 | likely_pathogenic | 0.9908 | pathogenic | -1.898 | Destabilizing | 0.998 | D | 0.708 | prob.neutral | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.306 | Highly Destabilizing | 0.993 | D | 0.857 | deleterious | None | None | None | None | N |
L/E | 0.9985 | likely_pathogenic | 0.9987 | pathogenic | -3.019 | Highly Destabilizing | 0.993 | D | 0.857 | deleterious | None | None | None | None | N |
L/F | 0.6257 | likely_pathogenic | 0.4067 | ambiguous | -1.61 | Destabilizing | 0.032 | N | 0.403 | neutral | D | 0.527357581 | None | None | N |
L/G | 0.9979 | likely_pathogenic | 0.9978 | pathogenic | -3.149 | Highly Destabilizing | 0.978 | D | 0.857 | deleterious | None | None | None | None | N |
L/H | 0.9968 | likely_pathogenic | 0.9956 | pathogenic | -2.68 | Highly Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
L/I | 0.4781 | ambiguous | 0.4465 | ambiguous | -0.923 | Destabilizing | 0.754 | D | 0.604 | neutral | None | None | None | None | N |
L/K | 0.996 | likely_pathogenic | 0.9962 | pathogenic | -2.12 | Highly Destabilizing | 0.978 | D | 0.843 | deleterious | None | None | None | None | N |
L/M | 0.4478 | ambiguous | 0.4151 | ambiguous | -0.962 | Destabilizing | 0.489 | N | 0.528 | neutral | D | 0.540897858 | None | None | N |
L/N | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -2.685 | Highly Destabilizing | 0.993 | D | 0.864 | deleterious | None | None | None | None | N |
L/P | 0.999 | likely_pathogenic | 0.9991 | pathogenic | -1.467 | Destabilizing | 0.993 | D | 0.86 | deleterious | None | None | None | None | N |
L/Q | 0.9946 | likely_pathogenic | 0.9945 | pathogenic | -2.437 | Highly Destabilizing | 0.978 | D | 0.859 | deleterious | None | None | None | None | N |
L/R | 0.9923 | likely_pathogenic | 0.9921 | pathogenic | -2.064 | Highly Destabilizing | 0.978 | D | 0.852 | deleterious | None | None | None | None | N |
L/S | 0.9987 | likely_pathogenic | 0.9987 | pathogenic | -3.281 | Highly Destabilizing | 0.971 | D | 0.834 | deleterious | D | 0.789501895 | None | None | N |
L/T | 0.9927 | likely_pathogenic | 0.9935 | pathogenic | -2.833 | Highly Destabilizing | 0.978 | D | 0.728 | prob.delet. | None | None | None | None | N |
L/V | 0.6131 | likely_pathogenic | 0.6094 | pathogenic | -1.467 | Destabilizing | 0.698 | D | 0.648 | neutral | D | 0.652121517 | None | None | N |
L/W | 0.9745 | likely_pathogenic | 0.9586 | pathogenic | -1.979 | Destabilizing | 0.997 | D | 0.808 | deleterious | D | 0.718266326 | None | None | N |
L/Y | 0.9827 | likely_pathogenic | 0.9668 | pathogenic | -1.703 | Destabilizing | 0.915 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.