Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9624 | 29095;29096;29097 | chr2:178707697;178707696;178707695 | chr2:179572424;179572423;179572422 |
N2AB | 9307 | 28144;28145;28146 | chr2:178707697;178707696;178707695 | chr2:179572424;179572423;179572422 |
N2A | 8380 | 25363;25364;25365 | chr2:178707697;178707696;178707695 | chr2:179572424;179572423;179572422 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/W | None | None | 1.0 | None | 0.732 | 0.437 | 0.747836230633 | gnomAD-4.0.0 | 1.59101E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6479 | likely_pathogenic | 0.5283 | ambiguous | -2.183 | Highly Destabilizing | 0.871 | D | 0.579 | neutral | None | None | None | None | N |
L/C | 0.7944 | likely_pathogenic | 0.6971 | pathogenic | -1.526 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
L/D | 0.9469 | likely_pathogenic | 0.893 | pathogenic | -2.034 | Highly Destabilizing | 0.991 | D | 0.748 | deleterious | None | None | None | None | N |
L/E | 0.6389 | likely_pathogenic | 0.4835 | ambiguous | -1.879 | Destabilizing | 0.991 | D | 0.72 | prob.delet. | None | None | None | None | N |
L/F | 0.1811 | likely_benign | 0.1564 | benign | -1.276 | Destabilizing | 0.989 | D | 0.571 | neutral | None | None | None | None | N |
L/G | 0.8482 | likely_pathogenic | 0.7545 | pathogenic | -2.662 | Highly Destabilizing | 0.97 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/H | 0.4452 | ambiguous | 0.3178 | benign | -2.006 | Highly Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
L/I | 0.1459 | likely_benign | 0.1374 | benign | -0.847 | Destabilizing | 0.942 | D | 0.52 | neutral | None | None | None | None | N |
L/K | 0.5439 | ambiguous | 0.4013 | ambiguous | -1.599 | Destabilizing | 0.991 | D | 0.694 | prob.neutral | None | None | None | None | N |
L/M | 0.1176 | likely_benign | 0.1082 | benign | -0.819 | Destabilizing | 0.489 | N | 0.411 | neutral | None | None | None | None | N |
L/N | 0.6954 | likely_pathogenic | 0.5887 | pathogenic | -1.73 | Destabilizing | 0.991 | D | 0.745 | deleterious | None | None | None | None | N |
L/P | 0.9904 | likely_pathogenic | 0.9835 | pathogenic | -1.268 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
L/Q | 0.2258 | likely_benign | 0.1457 | benign | -1.698 | Destabilizing | 0.996 | D | 0.724 | prob.delet. | None | None | None | None | N |
L/R | 0.4572 | ambiguous | 0.2919 | benign | -1.222 | Destabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | N |
L/S | 0.6125 | likely_pathogenic | 0.4773 | ambiguous | -2.451 | Highly Destabilizing | 0.489 | N | 0.549 | neutral | None | None | None | None | N |
L/T | 0.5125 | ambiguous | 0.4007 | ambiguous | -2.162 | Highly Destabilizing | 0.97 | D | 0.576 | neutral | None | None | None | None | N |
L/V | 0.1491 | likely_benign | 0.1376 | benign | -1.268 | Destabilizing | 0.835 | D | 0.572 | neutral | None | None | None | None | N |
L/W | 0.36 | ambiguous | 0.2609 | benign | -1.56 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
L/Y | 0.4718 | ambiguous | 0.4043 | ambiguous | -1.275 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.