Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9625 | 29098;29099;29100 | chr2:178707694;178707693;178707692 | chr2:179572421;179572420;179572419 |
N2AB | 9308 | 28147;28148;28149 | chr2:178707694;178707693;178707692 | chr2:179572421;179572420;179572419 |
N2A | 8381 | 25366;25367;25368 | chr2:178707694;178707693;178707692 | chr2:179572421;179572420;179572419 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.142 | None | 0.408 | 0.107 | 0.232513804876 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9559 | likely_pathogenic | 0.8722 | pathogenic | -0.798 | Destabilizing | 0.968 | D | 0.569 | neutral | None | None | None | None | N |
K/C | 0.9608 | likely_pathogenic | 0.914 | pathogenic | -0.679 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
K/D | 0.9928 | likely_pathogenic | 0.9798 | pathogenic | 0.087 | Stabilizing | 0.995 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/E | 0.9246 | likely_pathogenic | 0.7895 | pathogenic | 0.221 | Stabilizing | 0.958 | D | 0.552 | neutral | None | None | None | None | N |
K/F | 0.9713 | likely_pathogenic | 0.9423 | pathogenic | -0.513 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
K/G | 0.9758 | likely_pathogenic | 0.9309 | pathogenic | -1.172 | Destabilizing | 0.991 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/H | 0.6524 | likely_pathogenic | 0.5476 | ambiguous | -1.502 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
K/I | 0.9104 | likely_pathogenic | 0.7871 | pathogenic | 0.181 | Stabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | N |
K/L | 0.8284 | likely_pathogenic | 0.6869 | pathogenic | 0.181 | Stabilizing | 0.991 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/M | 0.8051 | likely_pathogenic | 0.6021 | pathogenic | 0.066 | Stabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/N | 0.9658 | likely_pathogenic | 0.9053 | pathogenic | -0.449 | Destabilizing | 0.988 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/P | 0.995 | likely_pathogenic | 0.9882 | pathogenic | -0.116 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/Q | 0.5958 | likely_pathogenic | 0.3931 | ambiguous | -0.461 | Destabilizing | 0.988 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/R | 0.1225 | likely_benign | 0.0968 | benign | -0.564 | Destabilizing | 0.142 | N | 0.408 | neutral | None | None | None | None | N |
K/S | 0.9734 | likely_pathogenic | 0.9141 | pathogenic | -1.193 | Destabilizing | 0.968 | D | 0.585 | neutral | None | None | None | None | N |
K/T | 0.9239 | likely_pathogenic | 0.7856 | pathogenic | -0.833 | Destabilizing | 0.988 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/V | 0.891 | likely_pathogenic | 0.7545 | pathogenic | -0.116 | Destabilizing | 0.995 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/W | 0.9589 | likely_pathogenic | 0.9263 | pathogenic | -0.359 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
K/Y | 0.9214 | likely_pathogenic | 0.8701 | pathogenic | -0.068 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.