Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9628 | 29107;29108;29109 | chr2:178707685;178707684;178707683 | chr2:179572412;179572411;179572410 |
N2AB | 9311 | 28156;28157;28158 | chr2:178707685;178707684;178707683 | chr2:179572412;179572411;179572410 |
N2A | 8384 | 25375;25376;25377 | chr2:178707685;178707684;178707683 | chr2:179572412;179572411;179572410 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.549 | None | 0.416 | 0.21 | 0.43848807779 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
R/W | rs1286102161 | None | 0.99 | None | 0.505 | 0.489 | 0.466486631293 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/W | rs1286102161 | None | 0.99 | None | 0.505 | 0.489 | 0.466486631293 | gnomAD-4.0.0 | 6.56927E-06 | None | None | None | None | N | None | 2.41173E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6392 | likely_pathogenic | 0.4685 | ambiguous | 0.011 | Stabilizing | 0.25 | N | 0.42 | neutral | None | None | None | None | N |
R/C | 0.4784 | ambiguous | 0.3374 | benign | -0.205 | Destabilizing | 0.992 | D | 0.437 | neutral | None | None | None | None | N |
R/D | 0.8511 | likely_pathogenic | 0.7632 | pathogenic | -0.257 | Destabilizing | 0.617 | D | 0.407 | neutral | None | None | None | None | N |
R/E | 0.5097 | ambiguous | 0.4058 | ambiguous | -0.221 | Destabilizing | 0.25 | N | 0.419 | neutral | None | None | None | None | N |
R/F | 0.7646 | likely_pathogenic | 0.6481 | pathogenic | -0.303 | Destabilizing | 0.972 | D | 0.417 | neutral | None | None | None | None | N |
R/G | 0.4612 | ambiguous | 0.2953 | benign | -0.127 | Destabilizing | 0.549 | D | 0.416 | neutral | None | None | None | None | N |
R/H | 0.1796 | likely_benign | 0.1485 | benign | -0.576 | Destabilizing | 0.92 | D | 0.389 | neutral | None | None | None | None | N |
R/I | 0.4566 | ambiguous | 0.3361 | benign | 0.328 | Stabilizing | 0.92 | D | 0.422 | neutral | None | None | None | None | N |
R/K | 0.1006 | likely_benign | 0.0972 | benign | -0.132 | Destabilizing | 0.001 | N | 0.18 | neutral | None | None | None | None | N |
R/L | 0.4668 | ambiguous | 0.3439 | ambiguous | 0.328 | Stabilizing | 0.617 | D | 0.416 | neutral | None | None | None | None | N |
R/M | 0.4348 | ambiguous | 0.3102 | benign | -0.047 | Destabilizing | 0.963 | D | 0.399 | neutral | None | None | None | None | N |
R/N | 0.7461 | likely_pathogenic | 0.6284 | pathogenic | 0.007 | Stabilizing | 0.617 | D | 0.397 | neutral | None | None | None | None | N |
R/P | 0.9484 | likely_pathogenic | 0.8881 | pathogenic | 0.24 | Stabilizing | 0.92 | D | 0.416 | neutral | None | None | None | None | N |
R/Q | 0.1442 | likely_benign | 0.1155 | benign | -0.063 | Destabilizing | 0.447 | N | 0.433 | neutral | None | None | None | None | N |
R/S | 0.7033 | likely_pathogenic | 0.5503 | ambiguous | -0.213 | Destabilizing | 0.379 | N | 0.415 | neutral | None | None | None | None | N |
R/T | 0.4371 | ambiguous | 0.3038 | benign | -0.072 | Destabilizing | 0.549 | D | 0.411 | neutral | None | None | None | None | N |
R/V | 0.5374 | ambiguous | 0.4193 | ambiguous | 0.24 | Stabilizing | 0.85 | D | 0.39 | neutral | None | None | None | None | N |
R/W | 0.3369 | likely_benign | 0.2406 | benign | -0.462 | Destabilizing | 0.99 | D | 0.505 | neutral | None | None | None | None | N |
R/Y | 0.6587 | likely_pathogenic | 0.5698 | pathogenic | -0.06 | Destabilizing | 0.972 | D | 0.42 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.