Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9629 | 29110;29111;29112 | chr2:178707682;178707681;178707680 | chr2:179572409;179572408;179572407 |
N2AB | 9312 | 28159;28160;28161 | chr2:178707682;178707681;178707680 | chr2:179572409;179572408;179572407 |
N2A | 8385 | 25378;25379;25380 | chr2:178707682;178707681;178707680 | chr2:179572409;179572408;179572407 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.998 | None | 0.578 | 0.384 | 0.440077040801 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4331 | ambiguous | 0.2842 | benign | -0.503 | Destabilizing | 0.998 | D | 0.647 | neutral | None | None | None | None | N |
E/C | 0.9851 | likely_pathogenic | 0.9707 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
E/D | 0.2832 | likely_benign | 0.2379 | benign | -0.616 | Destabilizing | 0.434 | N | 0.259 | neutral | None | None | None | None | N |
E/F | 0.9505 | likely_pathogenic | 0.9016 | pathogenic | -0.041 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/G | 0.5456 | ambiguous | 0.3551 | ambiguous | -0.774 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/H | 0.9013 | likely_pathogenic | 0.8 | pathogenic | 0.137 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/I | 0.6829 | likely_pathogenic | 0.552 | ambiguous | 0.205 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/K | 0.5819 | likely_pathogenic | 0.3936 | ambiguous | -0.022 | Destabilizing | 0.998 | D | 0.578 | neutral | None | None | None | None | N |
E/L | 0.7175 | likely_pathogenic | 0.5952 | pathogenic | 0.205 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/M | 0.7654 | likely_pathogenic | 0.6438 | pathogenic | 0.218 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/N | 0.6242 | likely_pathogenic | 0.479 | ambiguous | -0.545 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/P | 0.7481 | likely_pathogenic | 0.6358 | pathogenic | -0.01 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
E/Q | 0.4147 | ambiguous | 0.2894 | benign | -0.454 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
E/R | 0.7515 | likely_pathogenic | 0.5933 | pathogenic | 0.339 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/S | 0.5947 | likely_pathogenic | 0.4394 | ambiguous | -0.715 | Destabilizing | 0.997 | D | 0.614 | neutral | None | None | None | None | N |
E/T | 0.6042 | likely_pathogenic | 0.4393 | ambiguous | -0.49 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/V | 0.4763 | ambiguous | 0.3458 | ambiguous | -0.01 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
E/W | 0.9881 | likely_pathogenic | 0.9716 | pathogenic | 0.198 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/Y | 0.9239 | likely_pathogenic | 0.8563 | pathogenic | 0.213 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.