Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 963 | 3112;3113;3114 | chr2:178783019;178783018;178783017 | chr2:179647746;179647745;179647744 |
N2AB | 963 | 3112;3113;3114 | chr2:178783019;178783018;178783017 | chr2:179647746;179647745;179647744 |
N2A | 963 | 3112;3113;3114 | chr2:178783019;178783018;178783017 | chr2:179647746;179647745;179647744 |
N2B | 917 | 2974;2975;2976 | chr2:178783019;178783018;178783017 | chr2:179647746;179647745;179647744 |
Novex-1 | 917 | 2974;2975;2976 | chr2:178783019;178783018;178783017 | chr2:179647746;179647745;179647744 |
Novex-2 | 917 | 2974;2975;2976 | chr2:178783019;178783018;178783017 | chr2:179647746;179647745;179647744 |
Novex-3 | 963 | 3112;3113;3114 | chr2:178783019;178783018;178783017 | chr2:179647746;179647745;179647744 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1393032636 | -1.404 | 0.434 | N | 0.251 | 0.237 | 0.219573609325 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.63988E-04 |
E/D | rs1393032636 | -1.404 | 0.434 | N | 0.251 | 0.237 | 0.219573609325 | gnomAD-4.0.0 | 1.59056E-06 | None | None | None | None | N | None | 0 | 2.28624E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3914 | ambiguous | 0.4826 | ambiguous | -0.867 | Destabilizing | 0.998 | D | 0.607 | neutral | D | 0.555401178 | None | None | N |
E/C | 0.9793 | likely_pathogenic | 0.9849 | pathogenic | -0.599 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/D | 0.6848 | likely_pathogenic | 0.7506 | pathogenic | -1.391 | Destabilizing | 0.434 | N | 0.251 | neutral | N | 0.512002518 | None | None | N |
E/F | 0.9703 | likely_pathogenic | 0.9799 | pathogenic | -0.347 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
E/G | 0.7319 | likely_pathogenic | 0.8071 | pathogenic | -1.252 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | D | 0.608524531 | None | None | N |
E/H | 0.907 | likely_pathogenic | 0.9386 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/I | 0.7197 | likely_pathogenic | 0.777 | pathogenic | 0.192 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/K | 0.7068 | likely_pathogenic | 0.7943 | pathogenic | -0.985 | Destabilizing | 0.998 | D | 0.524 | neutral | N | 0.503373505 | None | None | N |
E/L | 0.831 | likely_pathogenic | 0.8789 | pathogenic | 0.192 | Stabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
E/M | 0.8152 | likely_pathogenic | 0.8595 | pathogenic | 0.665 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
E/N | 0.8286 | likely_pathogenic | 0.876 | pathogenic | -1.375 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/P | 0.9965 | likely_pathogenic | 0.9981 | pathogenic | -0.14 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
E/Q | 0.3279 | likely_benign | 0.3788 | ambiguous | -1.22 | Destabilizing | 0.999 | D | 0.664 | neutral | N | 0.511456543 | None | None | N |
E/R | 0.8086 | likely_pathogenic | 0.873 | pathogenic | -0.705 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
E/S | 0.5405 | ambiguous | 0.6234 | pathogenic | -1.728 | Destabilizing | 0.997 | D | 0.571 | neutral | None | None | None | None | N |
E/T | 0.5427 | ambiguous | 0.6248 | pathogenic | -1.415 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/V | 0.4836 | ambiguous | 0.5468 | ambiguous | -0.14 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.538670535 | None | None | N |
E/W | 0.9935 | likely_pathogenic | 0.9958 | pathogenic | -0.175 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/Y | 0.9621 | likely_pathogenic | 0.9751 | pathogenic | -0.131 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.