Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9630 | 29113;29114;29115 | chr2:178707679;178707678;178707677 | chr2:179572406;179572405;179572404 |
N2AB | 9313 | 28162;28163;28164 | chr2:178707679;178707678;178707677 | chr2:179572406;179572405;179572404 |
N2A | 8386 | 25381;25382;25383 | chr2:178707679;178707678;178707677 | chr2:179572406;179572405;179572404 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.062 | None | 0.476 | 0.413 | 0.628505682511 | gnomAD-4.0.0 | 1.36834E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31884E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7507 | likely_pathogenic | 0.6651 | pathogenic | -2.362 | Highly Destabilizing | 0.035 | N | 0.438 | neutral | None | None | None | None | N |
I/C | 0.8835 | likely_pathogenic | 0.838 | pathogenic | -1.49 | Destabilizing | 0.824 | D | 0.53 | neutral | None | None | None | None | N |
I/D | 0.9757 | likely_pathogenic | 0.9575 | pathogenic | -2.765 | Highly Destabilizing | 0.555 | D | 0.603 | neutral | None | None | None | None | N |
I/E | 0.9248 | likely_pathogenic | 0.8819 | pathogenic | -2.543 | Highly Destabilizing | 0.555 | D | 0.594 | neutral | None | None | None | None | N |
I/F | 0.3154 | likely_benign | 0.2493 | benign | -1.474 | Destabilizing | 0.38 | N | 0.503 | neutral | None | None | None | None | N |
I/G | 0.9177 | likely_pathogenic | 0.8633 | pathogenic | -2.863 | Highly Destabilizing | 0.555 | D | 0.585 | neutral | None | None | None | None | N |
I/H | 0.9274 | likely_pathogenic | 0.8794 | pathogenic | -2.203 | Highly Destabilizing | 0.935 | D | 0.596 | neutral | None | None | None | None | N |
I/K | 0.8774 | likely_pathogenic | 0.8067 | pathogenic | -1.847 | Destabilizing | 0.317 | N | 0.587 | neutral | None | None | None | None | N |
I/L | 0.1238 | likely_benign | 0.1127 | benign | -0.914 | Destabilizing | None | N | 0.091 | neutral | None | None | None | None | N |
I/M | 0.124 | likely_benign | 0.096 | benign | -0.766 | Destabilizing | 0.004 | N | 0.297 | neutral | None | None | None | None | N |
I/N | 0.8021 | likely_pathogenic | 0.7008 | pathogenic | -2.19 | Highly Destabilizing | 0.555 | D | 0.61 | neutral | None | None | None | None | N |
I/P | 0.9671 | likely_pathogenic | 0.9413 | pathogenic | -1.38 | Destabilizing | 0.791 | D | 0.605 | neutral | None | None | None | None | N |
I/Q | 0.868 | likely_pathogenic | 0.7867 | pathogenic | -2.08 | Highly Destabilizing | 0.555 | D | 0.613 | neutral | None | None | None | None | N |
I/R | 0.8352 | likely_pathogenic | 0.7342 | pathogenic | -1.574 | Destabilizing | 0.317 | N | 0.606 | neutral | None | None | None | None | N |
I/S | 0.8147 | likely_pathogenic | 0.7184 | pathogenic | -2.809 | Highly Destabilizing | 0.149 | N | 0.515 | neutral | None | None | None | None | N |
I/T | 0.7268 | likely_pathogenic | 0.6325 | pathogenic | -2.442 | Highly Destabilizing | 0.062 | N | 0.476 | neutral | None | None | None | None | N |
I/V | 0.0952 | likely_benign | 0.0866 | benign | -1.38 | Destabilizing | None | N | 0.111 | neutral | None | None | None | None | N |
I/W | 0.9119 | likely_pathogenic | 0.8595 | pathogenic | -1.806 | Destabilizing | 0.935 | D | 0.617 | neutral | None | None | None | None | N |
I/Y | 0.7703 | likely_pathogenic | 0.7009 | pathogenic | -1.493 | Destabilizing | 0.555 | D | 0.559 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.