Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9634 | 29125;29126;29127 | chr2:178707667;178707666;178707665 | chr2:179572394;179572393;179572392 |
N2AB | 9317 | 28174;28175;28176 | chr2:178707667;178707666;178707665 | chr2:179572394;179572393;179572392 |
N2A | 8390 | 25393;25394;25395 | chr2:178707667;178707666;178707665 | chr2:179572394;179572393;179572392 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs2076081318 | None | 0.003 | None | 0.148 | 0.076 | 0.255777322467 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.43E-05 | 0 | 0 | 0 | 0 |
D/E | rs2076081318 | None | 0.003 | None | 0.148 | 0.076 | 0.255777322467 | gnomAD-4.0.0 | 1.59109E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8577E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1708 | likely_benign | 0.1443 | benign | 0.107 | Stabilizing | 0.028 | N | 0.219 | neutral | None | None | None | None | N |
D/C | 0.7753 | likely_pathogenic | 0.6833 | pathogenic | -0.074 | Destabilizing | 0.996 | D | 0.323 | neutral | None | None | None | None | N |
D/E | 0.1361 | likely_benign | 0.1356 | benign | -0.35 | Destabilizing | 0.003 | N | 0.148 | neutral | None | None | None | None | N |
D/F | 0.675 | likely_pathogenic | 0.5765 | pathogenic | -0.096 | Destabilizing | 0.984 | D | 0.33 | neutral | None | None | None | None | N |
D/G | 0.1616 | likely_benign | 0.133 | benign | 0.033 | Stabilizing | 0.003 | N | 0.147 | neutral | None | None | None | None | N |
D/H | 0.3317 | likely_benign | 0.2624 | benign | 0.501 | Stabilizing | 0.939 | D | 0.267 | neutral | None | None | None | None | N |
D/I | 0.4415 | ambiguous | 0.3581 | ambiguous | 0.229 | Stabilizing | 0.953 | D | 0.367 | neutral | None | None | None | None | N |
D/K | 0.3598 | ambiguous | 0.2994 | benign | 0.434 | Stabilizing | 0.59 | D | 0.292 | neutral | None | None | None | None | N |
D/L | 0.4124 | ambiguous | 0.3274 | benign | 0.229 | Stabilizing | 0.742 | D | 0.364 | neutral | None | None | None | None | N |
D/M | 0.6806 | likely_pathogenic | 0.6124 | pathogenic | 0.052 | Stabilizing | 0.996 | D | 0.327 | neutral | None | None | None | None | N |
D/N | 0.1113 | likely_benign | 0.0963 | benign | 0.327 | Stabilizing | 0.007 | N | 0.145 | neutral | None | None | None | None | N |
D/P | 0.4571 | ambiguous | 0.4226 | ambiguous | 0.206 | Stabilizing | 0.953 | D | 0.324 | neutral | None | None | None | None | N |
D/Q | 0.3341 | likely_benign | 0.2899 | benign | 0.302 | Stabilizing | 0.59 | D | 0.265 | neutral | None | None | None | None | N |
D/R | 0.4128 | ambiguous | 0.3368 | benign | 0.586 | Stabilizing | 0.91 | D | 0.362 | neutral | None | None | None | None | N |
D/S | 0.1071 | likely_benign | 0.0969 | benign | 0.215 | Stabilizing | 0.373 | N | 0.192 | neutral | None | None | None | None | N |
D/T | 0.2703 | likely_benign | 0.2294 | benign | 0.279 | Stabilizing | 0.742 | D | 0.287 | neutral | None | None | None | None | N |
D/V | 0.2664 | likely_benign | 0.211 | benign | 0.206 | Stabilizing | 0.684 | D | 0.368 | neutral | None | None | None | None | N |
D/W | 0.9168 | likely_pathogenic | 0.8794 | pathogenic | -0.111 | Destabilizing | 0.996 | D | 0.417 | neutral | None | None | None | None | N |
D/Y | 0.3364 | likely_benign | 0.2697 | benign | 0.115 | Stabilizing | 0.979 | D | 0.327 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.