Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9638 | 29137;29138;29139 | chr2:178707655;178707654;178707653 | chr2:179572382;179572381;179572380 |
N2AB | 9321 | 28186;28187;28188 | chr2:178707655;178707654;178707653 | chr2:179572382;179572381;179572380 |
N2A | 8394 | 25405;25406;25407 | chr2:178707655;178707654;178707653 | chr2:179572382;179572381;179572380 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/V | rs2076079100 | None | 0.002 | None | 0.217 | 0.276 | 0.48300943003 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6794 | likely_pathogenic | 0.5803 | pathogenic | -2.253 | Highly Destabilizing | 0.329 | N | 0.363 | neutral | None | None | None | None | N |
F/C | 0.4176 | ambiguous | 0.3424 | ambiguous | -1.287 | Destabilizing | 0.975 | D | 0.515 | neutral | None | None | None | None | N |
F/D | 0.9438 | likely_pathogenic | 0.8901 | pathogenic | -1.18 | Destabilizing | 0.981 | D | 0.591 | neutral | None | None | None | None | N |
F/E | 0.9378 | likely_pathogenic | 0.8968 | pathogenic | -1.06 | Destabilizing | 0.828 | D | 0.6 | neutral | None | None | None | None | N |
F/G | 0.8799 | likely_pathogenic | 0.8132 | pathogenic | -2.627 | Highly Destabilizing | 0.828 | D | 0.587 | neutral | None | None | None | None | N |
F/H | 0.7373 | likely_pathogenic | 0.6458 | pathogenic | -0.954 | Destabilizing | 0.981 | D | 0.525 | neutral | None | None | None | None | N |
F/I | 0.1714 | likely_benign | 0.1466 | benign | -1.108 | Destabilizing | 0.003 | N | 0.091 | neutral | None | None | None | None | N |
F/K | 0.9267 | likely_pathogenic | 0.887 | pathogenic | -1.384 | Destabilizing | 0.828 | D | 0.583 | neutral | None | None | None | None | N |
F/L | 0.7258 | likely_pathogenic | 0.7001 | pathogenic | -1.108 | Destabilizing | 0.002 | N | 0.099 | neutral | None | None | None | None | N |
F/M | 0.4576 | ambiguous | 0.4646 | ambiguous | -0.856 | Destabilizing | 0.176 | N | 0.244 | neutral | None | None | None | None | N |
F/N | 0.7968 | likely_pathogenic | 0.7179 | pathogenic | -1.494 | Destabilizing | 0.981 | D | 0.547 | neutral | None | None | None | None | N |
F/P | 0.9843 | likely_pathogenic | 0.9695 | pathogenic | -1.487 | Destabilizing | 0.981 | D | 0.545 | neutral | None | None | None | None | N |
F/Q | 0.8677 | likely_pathogenic | 0.8081 | pathogenic | -1.511 | Destabilizing | 0.944 | D | 0.527 | neutral | None | None | None | None | N |
F/R | 0.8644 | likely_pathogenic | 0.7769 | pathogenic | -0.819 | Destabilizing | 0.944 | D | 0.555 | neutral | None | None | None | None | N |
F/S | 0.5596 | ambiguous | 0.4357 | ambiguous | -2.296 | Highly Destabilizing | 0.784 | D | 0.514 | neutral | None | None | None | None | N |
F/T | 0.6198 | likely_pathogenic | 0.5318 | ambiguous | -2.072 | Highly Destabilizing | 0.704 | D | 0.485 | neutral | None | None | None | None | N |
F/V | 0.1797 | likely_benign | 0.1561 | benign | -1.487 | Destabilizing | 0.002 | N | 0.217 | neutral | None | None | None | None | N |
F/W | 0.6567 | likely_pathogenic | 0.5911 | pathogenic | -0.26 | Destabilizing | 0.995 | D | 0.472 | neutral | None | None | None | None | N |
F/Y | 0.1778 | likely_benign | 0.157 | benign | -0.532 | Destabilizing | 0.784 | D | 0.407 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.