Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9643 | 29152;29153;29154 | chr2:178707640;178707639;178707638 | chr2:179572367;179572366;179572365 |
N2AB | 9326 | 28201;28202;28203 | chr2:178707640;178707639;178707638 | chr2:179572367;179572366;179572365 |
N2A | 8399 | 25420;25421;25422 | chr2:178707640;178707639;178707638 | chr2:179572367;179572366;179572365 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs1190523795 | -0.518 | 0.201 | None | 0.609 | 0.25 | 0.227260227426 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
G/A | rs1190523795 | -0.518 | 0.201 | None | 0.609 | 0.25 | 0.227260227426 | gnomAD-4.0.0 | 4.78933E-06 | None | None | None | None | N | None | 0 | 2.23744E-05 | None | 0 | 0 | None | 0 | 0 | 5.39657E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3969 | ambiguous | 0.2741 | benign | -0.621 | Destabilizing | 0.201 | N | 0.609 | neutral | None | None | None | None | N |
G/C | 0.6392 | likely_pathogenic | 0.4693 | ambiguous | -0.803 | Destabilizing | 0.982 | D | 0.763 | deleterious | None | None | None | None | N |
G/D | 0.3963 | ambiguous | 0.3069 | benign | -0.887 | Destabilizing | 0.539 | D | 0.735 | prob.delet. | None | None | None | None | N |
G/E | 0.4634 | ambiguous | 0.3074 | benign | -0.923 | Destabilizing | 0.468 | N | 0.713 | prob.delet. | None | None | None | None | N |
G/F | 0.8969 | likely_pathogenic | 0.805 | pathogenic | -0.986 | Destabilizing | 0.947 | D | 0.769 | deleterious | None | None | None | None | N |
G/H | 0.6035 | likely_pathogenic | 0.3799 | ambiguous | -1.313 | Destabilizing | 0.947 | D | 0.739 | prob.delet. | None | None | None | None | N |
G/I | 0.8673 | likely_pathogenic | 0.7336 | pathogenic | -0.18 | Destabilizing | 0.826 | D | 0.775 | deleterious | None | None | None | None | N |
G/K | 0.5586 | ambiguous | 0.3277 | benign | -1.057 | Destabilizing | 0.25 | N | 0.694 | prob.neutral | None | None | None | None | N |
G/L | 0.8469 | likely_pathogenic | 0.6908 | pathogenic | -0.18 | Destabilizing | 0.7 | D | 0.785 | deleterious | None | None | None | None | N |
G/M | 0.8501 | likely_pathogenic | 0.7122 | pathogenic | -0.183 | Destabilizing | 0.947 | D | 0.763 | deleterious | None | None | None | None | N |
G/N | 0.3821 | ambiguous | 0.3182 | benign | -0.779 | Destabilizing | 0.02 | N | 0.425 | neutral | None | None | None | None | N |
G/P | 0.9709 | likely_pathogenic | 0.9442 | pathogenic | -0.284 | Destabilizing | 0.826 | D | 0.766 | deleterious | None | None | None | None | N |
G/Q | 0.4929 | ambiguous | 0.2861 | benign | -0.899 | Destabilizing | 0.045 | N | 0.61 | neutral | None | None | None | None | N |
G/R | 0.4344 | ambiguous | 0.2048 | benign | -0.83 | Destabilizing | 0.008 | N | 0.598 | neutral | None | None | None | None | N |
G/S | 0.1877 | likely_benign | 0.1446 | benign | -1.07 | Destabilizing | 0.25 | N | 0.663 | neutral | None | None | None | None | N |
G/T | 0.503 | ambiguous | 0.3666 | ambiguous | -1.01 | Destabilizing | 0.7 | D | 0.73 | prob.delet. | None | None | None | None | N |
G/V | 0.7785 | likely_pathogenic | 0.6042 | pathogenic | -0.284 | Destabilizing | 0.638 | D | 0.799 | deleterious | None | None | None | None | N |
G/W | 0.7933 | likely_pathogenic | 0.6288 | pathogenic | -1.394 | Destabilizing | 0.976 | D | 0.723 | prob.delet. | None | None | None | None | N |
G/Y | 0.7996 | likely_pathogenic | 0.6524 | pathogenic | -0.925 | Destabilizing | 0.947 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.