Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9647 | 29164;29165;29166 | chr2:178707628;178707627;178707626 | chr2:179572355;179572354;179572353 |
N2AB | 9330 | 28213;28214;28215 | chr2:178707628;178707627;178707626 | chr2:179572355;179572354;179572353 |
N2A | 8403 | 25432;25433;25434 | chr2:178707628;178707627;178707626 | chr2:179572355;179572354;179572353 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | -0.916 | 1.0 | None | 0.78 | 0.569 | 0.709279802104 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
L/M | None | -0.916 | 1.0 | None | 0.78 | 0.569 | 0.709279802104 | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85788E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.882 | likely_pathogenic | 0.8387 | pathogenic | -2.389 | Highly Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
L/C | 0.8765 | likely_pathogenic | 0.8529 | pathogenic | -1.704 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -3.217 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/E | 0.9945 | likely_pathogenic | 0.9934 | pathogenic | -2.894 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
L/F | 0.3886 | ambiguous | 0.3338 | benign | -1.485 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
L/G | 0.9795 | likely_pathogenic | 0.9701 | pathogenic | -3.005 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
L/H | 0.9848 | likely_pathogenic | 0.9782 | pathogenic | -2.834 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/I | 0.2749 | likely_benign | 0.2444 | benign | -0.55 | Destabilizing | 0.999 | D | 0.672 | neutral | None | None | None | None | N |
L/K | 0.9906 | likely_pathogenic | 0.9889 | pathogenic | -1.86 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
L/M | 0.2145 | likely_benign | 0.1963 | benign | -0.712 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
L/N | 0.9966 | likely_pathogenic | 0.9956 | pathogenic | -2.587 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/P | 0.996 | likely_pathogenic | 0.9948 | pathogenic | -1.152 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/Q | 0.9692 | likely_pathogenic | 0.9606 | pathogenic | -2.224 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/R | 0.9757 | likely_pathogenic | 0.9688 | pathogenic | -1.986 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/S | 0.9867 | likely_pathogenic | 0.978 | pathogenic | -3.143 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
L/T | 0.9555 | likely_pathogenic | 0.9313 | pathogenic | -2.645 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
L/V | 0.2975 | likely_benign | 0.2573 | benign | -1.152 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
L/W | 0.9021 | likely_pathogenic | 0.8546 | pathogenic | -1.948 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/Y | 0.9377 | likely_pathogenic | 0.9259 | pathogenic | -1.638 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.