Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 965 | 3118;3119;3120 | chr2:178783013;178783012;178783011 | chr2:179647740;179647739;179647738 |
N2AB | 965 | 3118;3119;3120 | chr2:178783013;178783012;178783011 | chr2:179647740;179647739;179647738 |
N2A | 965 | 3118;3119;3120 | chr2:178783013;178783012;178783011 | chr2:179647740;179647739;179647738 |
N2B | 919 | 2980;2981;2982 | chr2:178783013;178783012;178783011 | chr2:179647740;179647739;179647738 |
Novex-1 | 919 | 2980;2981;2982 | chr2:178783013;178783012;178783011 | chr2:179647740;179647739;179647738 |
Novex-2 | 919 | 2980;2981;2982 | chr2:178783013;178783012;178783011 | chr2:179647740;179647739;179647738 |
Novex-3 | 965 | 3118;3119;3120 | chr2:178783013;178783012;178783011 | chr2:179647740;179647739;179647738 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | None | None | 0.784 | N | 0.589 | 0.44 | 0.539656846532 | gnomAD-4.0.0 | 1.59055E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
H/Y | rs761450193 | 0.612 | 0.917 | N | 0.415 | 0.308 | 0.408853032482 | gnomAD-2.1.1 | 7.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
H/Y | rs761450193 | 0.612 | 0.917 | N | 0.415 | 0.308 | 0.408853032482 | gnomAD-4.0.0 | 3.18112E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71318E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4749 | ambiguous | 0.57 | pathogenic | -0.76 | Destabilizing | 0.329 | N | 0.481 | neutral | None | None | None | None | N |
H/C | 0.3207 | likely_benign | 0.4036 | ambiguous | -0.094 | Destabilizing | 0.995 | D | 0.585 | neutral | None | None | None | None | N |
H/D | 0.4221 | ambiguous | 0.5538 | ambiguous | -0.206 | Destabilizing | 0.642 | D | 0.486 | neutral | N | 0.453017927 | None | None | N |
H/E | 0.397 | ambiguous | 0.4856 | ambiguous | -0.143 | Destabilizing | 0.329 | N | 0.31 | neutral | None | None | None | None | N |
H/F | 0.4362 | ambiguous | 0.4874 | ambiguous | 0.052 | Stabilizing | 0.944 | D | 0.564 | neutral | None | None | None | None | N |
H/G | 0.5968 | likely_pathogenic | 0.7179 | pathogenic | -1.082 | Destabilizing | 0.495 | N | 0.519 | neutral | None | None | None | None | N |
H/I | 0.4503 | ambiguous | 0.5261 | ambiguous | 0.101 | Stabilizing | 0.893 | D | 0.61 | neutral | None | None | None | None | N |
H/K | 0.3105 | likely_benign | 0.359 | ambiguous | -0.677 | Destabilizing | 0.329 | N | 0.457 | neutral | None | None | None | None | N |
H/L | 0.1815 | likely_benign | 0.2222 | benign | 0.101 | Stabilizing | 0.27 | N | 0.537 | neutral | N | 0.413839751 | None | None | N |
H/M | 0.6471 | likely_pathogenic | 0.6994 | pathogenic | 0.016 | Stabilizing | 0.981 | D | 0.574 | neutral | None | None | None | None | N |
H/N | 0.1676 | likely_benign | 0.2031 | benign | -0.573 | Destabilizing | 0.425 | N | 0.379 | neutral | N | 0.455475201 | None | None | N |
H/P | 0.6287 | likely_pathogenic | 0.7504 | pathogenic | -0.163 | Destabilizing | 0.784 | D | 0.589 | neutral | N | 0.455593356 | None | None | N |
H/Q | 0.222 | likely_benign | 0.2643 | benign | -0.423 | Destabilizing | 0.003 | N | 0.123 | neutral | N | 0.401748045 | None | None | N |
H/R | 0.1057 | likely_benign | 0.1298 | benign | -0.996 | Destabilizing | 0.006 | N | 0.136 | neutral | N | 0.356367799 | None | None | N |
H/S | 0.3534 | ambiguous | 0.4382 | ambiguous | -0.718 | Destabilizing | 0.329 | N | 0.452 | neutral | None | None | None | None | N |
H/T | 0.4001 | ambiguous | 0.4783 | ambiguous | -0.557 | Destabilizing | 0.013 | N | 0.313 | neutral | None | None | None | None | N |
H/V | 0.3786 | ambiguous | 0.4423 | ambiguous | -0.163 | Destabilizing | 0.543 | D | 0.586 | neutral | None | None | None | None | N |
H/W | 0.5359 | ambiguous | 0.6083 | pathogenic | 0.287 | Stabilizing | 0.995 | D | 0.573 | neutral | None | None | None | None | N |
H/Y | 0.1359 | likely_benign | 0.1565 | benign | 0.505 | Stabilizing | 0.917 | D | 0.415 | neutral | N | 0.488521823 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.