Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9651 | 29176;29177;29178 | chr2:178707616;178707615;178707614 | chr2:179572343;179572342;179572341 |
N2AB | 9334 | 28225;28226;28227 | chr2:178707616;178707615;178707614 | chr2:179572343;179572342;179572341 |
N2A | 8407 | 25444;25445;25446 | chr2:178707616;178707615;178707614 | chr2:179572343;179572342;179572341 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | None | None | 0.087 | 0.049 | 0.0482279557977 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
D/N | None | None | None | None | 0.109 | 0.088 | 0.0666544352282 | gnomAD-4.0.0 | 2.73677E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59774E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1486 | likely_benign | 0.1143 | benign | -0.184 | Destabilizing | None | N | 0.103 | neutral | None | None | None | None | N |
D/C | 0.6428 | likely_pathogenic | 0.4958 | ambiguous | 0.069 | Stabilizing | 0.356 | N | 0.396 | neutral | None | None | None | None | N |
D/E | 0.1291 | likely_benign | 0.1127 | benign | -0.264 | Destabilizing | None | N | 0.087 | neutral | None | None | None | None | N |
D/F | 0.5527 | ambiguous | 0.4386 | ambiguous | -0.189 | Destabilizing | 0.356 | N | 0.434 | neutral | None | None | None | None | N |
D/G | 0.1127 | likely_benign | 0.0962 | benign | -0.364 | Destabilizing | 0.005 | N | 0.307 | neutral | None | None | None | None | N |
D/H | 0.268 | likely_benign | 0.2065 | benign | 0.012 | Stabilizing | 0.295 | N | 0.316 | neutral | None | None | None | None | N |
D/I | 0.4425 | ambiguous | 0.3268 | benign | 0.237 | Stabilizing | 0.072 | N | 0.457 | neutral | None | None | None | None | N |
D/K | 0.3022 | likely_benign | 0.2436 | benign | 0.365 | Stabilizing | 0.016 | N | 0.332 | neutral | None | None | None | None | N |
D/L | 0.3777 | ambiguous | 0.2906 | benign | 0.237 | Stabilizing | 0.031 | N | 0.337 | neutral | None | None | None | None | N |
D/M | 0.5935 | likely_pathogenic | 0.476 | ambiguous | 0.315 | Stabilizing | 0.628 | D | 0.417 | neutral | None | None | None | None | N |
D/N | 0.0904 | likely_benign | 0.0772 | benign | 0.14 | Stabilizing | None | N | 0.109 | neutral | None | None | None | None | N |
D/P | 0.5711 | likely_pathogenic | 0.453 | ambiguous | 0.119 | Stabilizing | None | N | 0.107 | neutral | None | None | None | None | N |
D/Q | 0.2859 | likely_benign | 0.2327 | benign | 0.151 | Stabilizing | 0.003 | N | 0.178 | neutral | None | None | None | None | N |
D/R | 0.3501 | ambiguous | 0.2739 | benign | 0.523 | Stabilizing | None | N | 0.211 | neutral | None | None | None | None | N |
D/S | 0.1214 | likely_benign | 0.1003 | benign | 0.017 | Stabilizing | 0.001 | N | 0.109 | neutral | None | None | None | None | N |
D/T | 0.2516 | likely_benign | 0.188 | benign | 0.154 | Stabilizing | 0.031 | N | 0.315 | neutral | None | None | None | None | N |
D/V | 0.2569 | likely_benign | 0.1869 | benign | 0.119 | Stabilizing | 0.012 | N | 0.365 | neutral | None | None | None | None | N |
D/W | 0.8493 | likely_pathogenic | 0.7618 | pathogenic | -0.089 | Destabilizing | 0.864 | D | 0.411 | neutral | None | None | None | None | N |
D/Y | 0.2302 | likely_benign | 0.1814 | benign | 0.046 | Stabilizing | 0.56 | D | 0.449 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.