Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9656 | 29191;29192;29193 | chr2:178707601;178707600;178707599 | chr2:179572328;179572327;179572326 |
N2AB | 9339 | 28240;28241;28242 | chr2:178707601;178707600;178707599 | chr2:179572328;179572327;179572326 |
N2A | 8412 | 25459;25460;25461 | chr2:178707601;178707600;178707599 | chr2:179572328;179572327;179572326 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1064797277 | None | 0.946 | None | 0.804 | 0.589 | 0.606648057779 | gnomAD-4.0.0 | 1.36839E-06 | None | None | None | None | N | None | 2.98704E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65662E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6984 | likely_pathogenic | 0.5868 | pathogenic | 0.016 | Stabilizing | 0.898 | D | 0.859 | deleterious | None | None | None | None | N |
D/C | 0.9583 | likely_pathogenic | 0.9356 | pathogenic | 0.039 | Stabilizing | 0.998 | D | 0.891 | deleterious | None | None | None | None | N |
D/E | 0.4827 | ambiguous | 0.5451 | ambiguous | -0.541 | Destabilizing | 0.016 | N | 0.351 | neutral | None | None | None | None | N |
D/F | 0.9333 | likely_pathogenic | 0.9035 | pathogenic | 0.745 | Stabilizing | 0.998 | D | 0.915 | deleterious | None | None | None | None | N |
D/G | 0.7927 | likely_pathogenic | 0.7167 | pathogenic | -0.377 | Destabilizing | 0.834 | D | 0.807 | deleterious | None | None | None | None | N |
D/H | 0.7937 | likely_pathogenic | 0.7494 | pathogenic | 0.605 | Stabilizing | 0.993 | D | 0.857 | deleterious | None | None | None | None | N |
D/I | 0.8973 | likely_pathogenic | 0.8507 | pathogenic | 1.058 | Stabilizing | 0.979 | D | 0.906 | deleterious | None | None | None | None | N |
D/K | 0.9363 | likely_pathogenic | 0.9299 | pathogenic | 0.289 | Stabilizing | 0.921 | D | 0.829 | deleterious | None | None | None | None | N |
D/L | 0.9096 | likely_pathogenic | 0.8666 | pathogenic | 1.058 | Stabilizing | 0.959 | D | 0.903 | deleterious | None | None | None | None | N |
D/M | 0.9571 | likely_pathogenic | 0.9395 | pathogenic | 1.265 | Stabilizing | 0.998 | D | 0.891 | deleterious | None | None | None | None | N |
D/N | 0.4743 | ambiguous | 0.3832 | ambiguous | -0.541 | Destabilizing | 0.946 | D | 0.804 | deleterious | None | None | None | None | N |
D/P | 0.9893 | likely_pathogenic | 0.9829 | pathogenic | 0.738 | Stabilizing | 0.979 | D | 0.855 | deleterious | None | None | None | None | N |
D/Q | 0.8408 | likely_pathogenic | 0.8325 | pathogenic | -0.301 | Destabilizing | 0.921 | D | 0.809 | deleterious | None | None | None | None | N |
D/R | 0.9489 | likely_pathogenic | 0.9368 | pathogenic | 0.474 | Stabilizing | 0.959 | D | 0.897 | deleterious | None | None | None | None | N |
D/S | 0.562 | ambiguous | 0.4552 | ambiguous | -0.71 | Destabilizing | 0.769 | D | 0.732 | prob.delet. | None | None | None | None | N |
D/T | 0.841 | likely_pathogenic | 0.7784 | pathogenic | -0.349 | Destabilizing | 0.959 | D | 0.837 | deleterious | None | None | None | None | N |
D/V | 0.7665 | likely_pathogenic | 0.6942 | pathogenic | 0.738 | Stabilizing | 0.946 | D | 0.907 | deleterious | None | None | None | None | N |
D/W | 0.9913 | likely_pathogenic | 0.9871 | pathogenic | 0.966 | Stabilizing | 0.998 | D | 0.871 | deleterious | None | None | None | None | N |
D/Y | 0.7325 | likely_pathogenic | 0.6556 | pathogenic | 1.049 | Stabilizing | 0.998 | D | 0.916 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.