Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9659 | 29200;29201;29202 | chr2:178707592;178707591;178707590 | chr2:179572319;179572318;179572317 |
N2AB | 9342 | 28249;28250;28251 | chr2:178707592;178707591;178707590 | chr2:179572319;179572318;179572317 |
N2A | 8415 | 25468;25469;25470 | chr2:178707592;178707591;178707590 | chr2:179572319;179572318;179572317 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.994 | None | 0.845 | 0.392 | 0.635563547672 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3575 | ambiguous | 0.2474 | benign | -0.623 | Destabilizing | 0.958 | D | 0.707 | prob.neutral | None | None | None | None | N |
D/C | 0.8787 | likely_pathogenic | 0.7796 | pathogenic | -0.245 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
D/E | 0.1905 | likely_benign | 0.1755 | benign | -0.582 | Destabilizing | 0.067 | N | 0.247 | neutral | None | None | None | None | N |
D/F | 0.7466 | likely_pathogenic | 0.6131 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
D/G | 0.4604 | ambiguous | 0.3146 | benign | -0.965 | Destabilizing | 0.958 | D | 0.697 | prob.neutral | None | None | None | None | N |
D/H | 0.5684 | likely_pathogenic | 0.4223 | ambiguous | -0.391 | Destabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | N |
D/I | 0.4399 | ambiguous | 0.3434 | ambiguous | 0.282 | Stabilizing | 0.995 | D | 0.847 | deleterious | None | None | None | None | N |
D/K | 0.6961 | likely_pathogenic | 0.575 | pathogenic | -0.266 | Destabilizing | 0.982 | D | 0.757 | deleterious | None | None | None | None | N |
D/L | 0.5569 | ambiguous | 0.4381 | ambiguous | 0.282 | Stabilizing | 0.991 | D | 0.849 | deleterious | None | None | None | None | N |
D/M | 0.7654 | likely_pathogenic | 0.6796 | pathogenic | 0.669 | Stabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
D/N | 0.1653 | likely_benign | 0.1249 | benign | -0.755 | Destabilizing | 0.988 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/P | 0.8611 | likely_pathogenic | 0.7953 | pathogenic | 0.005 | Stabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | N |
D/Q | 0.5804 | likely_pathogenic | 0.4778 | ambiguous | -0.622 | Destabilizing | 0.982 | D | 0.732 | prob.delet. | None | None | None | None | N |
D/R | 0.7482 | likely_pathogenic | 0.6052 | pathogenic | -0.077 | Destabilizing | 0.991 | D | 0.821 | deleterious | None | None | None | None | N |
D/S | 0.238 | likely_benign | 0.1746 | benign | -0.982 | Destabilizing | 0.968 | D | 0.615 | neutral | None | None | None | None | N |
D/T | 0.3931 | ambiguous | 0.3008 | benign | -0.696 | Destabilizing | 0.991 | D | 0.754 | deleterious | None | None | None | None | N |
D/V | 0.3116 | likely_benign | 0.227 | benign | 0.005 | Stabilizing | 0.994 | D | 0.845 | deleterious | None | None | None | None | N |
D/W | 0.9556 | likely_pathogenic | 0.9199 | pathogenic | 0.116 | Stabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
D/Y | 0.3987 | ambiguous | 0.2787 | benign | 0.13 | Stabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.