Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9662 | 29209;29210;29211 | chr2:178707583;178707582;178707581 | chr2:179572310;179572309;179572308 |
N2AB | 9345 | 28258;28259;28260 | chr2:178707583;178707582;178707581 | chr2:179572310;179572309;179572308 |
N2A | 8418 | 25477;25478;25479 | chr2:178707583;178707582;178707581 | chr2:179572310;179572309;179572308 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | None | None | 1.0 | None | 0.903 | 0.856 | 0.883469295186 | gnomAD-4.0.0 | 1.59122E-06 | None | None | disulfide | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85801E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.9209 | likely_pathogenic | 0.8958 | pathogenic | -1.389 | Destabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | disulfide | None | N |
C/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -1.423 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | disulfide | None | N |
C/E | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -1.175 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | disulfide | None | N |
C/F | 0.9204 | likely_pathogenic | 0.8721 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | disulfide | None | N |
C/G | 0.8816 | likely_pathogenic | 0.816 | pathogenic | -1.751 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | disulfide | None | N |
C/H | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -1.942 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | disulfide | None | N |
C/I | 0.8844 | likely_pathogenic | 0.8892 | pathogenic | -0.4 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | disulfide | None | N |
C/K | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -0.879 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | disulfide | None | N |
C/L | 0.8036 | likely_pathogenic | 0.7987 | pathogenic | -0.4 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | disulfide | None | N |
C/M | 0.9644 | likely_pathogenic | 0.9609 | pathogenic | 0.38 | Stabilizing | 1.0 | D | 0.833 | deleterious | None | None | disulfide | None | N |
C/N | 0.9985 | likely_pathogenic | 0.998 | pathogenic | -1.573 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | disulfide | None | N |
C/P | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -0.708 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | disulfide | None | N |
C/Q | 0.9992 | likely_pathogenic | 0.9988 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | disulfide | None | N |
C/R | 0.9975 | likely_pathogenic | 0.9966 | pathogenic | -1.371 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | disulfide | None | N |
C/S | 0.9761 | likely_pathogenic | 0.9629 | pathogenic | -1.831 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | disulfide | None | N |
C/T | 0.9831 | likely_pathogenic | 0.9775 | pathogenic | -1.401 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | disulfide | None | N |
C/V | 0.8018 | likely_pathogenic | 0.7985 | pathogenic | -0.708 | Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | disulfide | None | N |
C/W | 0.9957 | likely_pathogenic | 0.9929 | pathogenic | -1.194 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | disulfide | None | N |
C/Y | 0.9893 | likely_pathogenic | 0.9837 | pathogenic | -0.961 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | disulfide | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.