Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9669 | 29230;29231;29232 | chr2:178707562;178707561;178707560 | chr2:179572289;179572288;179572287 |
N2AB | 9352 | 28279;28280;28281 | chr2:178707562;178707561;178707560 | chr2:179572289;179572288;179572287 |
N2A | 8425 | 25498;25499;25500 | chr2:178707562;178707561;178707560 | chr2:179572289;179572288;179572287 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 1.0 | None | 0.859 | 0.806 | 0.874896931464 | gnomAD-4.0.0 | 5.47421E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.885 | likely_pathogenic | 0.6014 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
G/C | 0.9775 | likely_pathogenic | 0.8682 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
G/D | 0.9838 | likely_pathogenic | 0.9022 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
G/E | 0.989 | likely_pathogenic | 0.9239 | pathogenic | -0.742 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
G/F | 0.9943 | likely_pathogenic | 0.9686 | pathogenic | -1.08 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
G/H | 0.9941 | likely_pathogenic | 0.958 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
G/I | 0.9958 | likely_pathogenic | 0.9631 | pathogenic | -0.507 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/K | 0.9926 | likely_pathogenic | 0.9527 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
G/L | 0.9938 | likely_pathogenic | 0.9562 | pathogenic | -0.507 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
G/M | 0.9968 | likely_pathogenic | 0.9728 | pathogenic | -0.5 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
G/N | 0.9853 | likely_pathogenic | 0.9006 | pathogenic | -0.355 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
G/P | 0.9995 | likely_pathogenic | 0.9976 | pathogenic | -0.398 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/Q | 0.9887 | likely_pathogenic | 0.9249 | pathogenic | -0.661 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
G/R | 0.9769 | likely_pathogenic | 0.8797 | pathogenic | -0.21 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
G/S | 0.8439 | likely_pathogenic | 0.4807 | ambiguous | -0.48 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
G/T | 0.9817 | likely_pathogenic | 0.8674 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
G/V | 0.9882 | likely_pathogenic | 0.915 | pathogenic | -0.398 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
G/W | 0.9932 | likely_pathogenic | 0.9609 | pathogenic | -1.189 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/Y | 0.9926 | likely_pathogenic | 0.9552 | pathogenic | -0.854 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.