Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 9671 | 29236;29237;29238 | chr2:178707556;178707555;178707554 | chr2:179572283;179572282;179572281 |
N2AB | 9354 | 28285;28286;28287 | chr2:178707556;178707555;178707554 | chr2:179572283;179572282;179572281 |
N2A | 8427 | 25504;25505;25506 | chr2:178707556;178707555;178707554 | chr2:179572283;179572282;179572281 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs530627450 | -1.279 | 0.989 | None | 0.683 | 0.532 | 0.440498838766 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
D/G | rs530627450 | -1.279 | 0.989 | None | 0.683 | 0.532 | 0.440498838766 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
D/G | rs530627450 | -1.279 | 0.989 | None | 0.683 | 0.532 | 0.440498838766 | gnomAD-4.0.0 | 6.56435E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3488 | ambiguous | 0.2512 | benign | -0.738 | Destabilizing | 0.977 | D | 0.727 | prob.delet. | None | None | None | None | I |
D/C | 0.9011 | likely_pathogenic | 0.8283 | pathogenic | -0.252 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
D/E | 0.3769 | ambiguous | 0.2959 | benign | -0.638 | Destabilizing | 0.117 | N | 0.25 | neutral | None | None | None | None | I |
D/F | 0.8996 | likely_pathogenic | 0.8325 | pathogenic | -0.264 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
D/G | 0.4497 | ambiguous | 0.3379 | benign | -1.107 | Destabilizing | 0.989 | D | 0.683 | prob.neutral | None | None | None | None | I |
D/H | 0.7074 | likely_pathogenic | 0.5893 | pathogenic | -0.53 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | I |
D/I | 0.8224 | likely_pathogenic | 0.6997 | pathogenic | 0.249 | Stabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | I |
D/K | 0.8038 | likely_pathogenic | 0.7201 | pathogenic | -0.347 | Destabilizing | 0.99 | D | 0.715 | prob.delet. | None | None | None | None | I |
D/L | 0.835 | likely_pathogenic | 0.7367 | pathogenic | 0.249 | Stabilizing | 0.995 | D | 0.83 | deleterious | None | None | None | None | I |
D/M | 0.9231 | likely_pathogenic | 0.8659 | pathogenic | 0.736 | Stabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
D/N | 0.2194 | likely_benign | 0.1702 | benign | -0.821 | Destabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | I |
D/P | 0.9931 | likely_pathogenic | 0.9845 | pathogenic | -0.055 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | I |
D/Q | 0.712 | likely_pathogenic | 0.6239 | pathogenic | -0.684 | Destabilizing | 0.99 | D | 0.755 | deleterious | None | None | None | None | I |
D/R | 0.8296 | likely_pathogenic | 0.7466 | pathogenic | -0.172 | Destabilizing | 0.995 | D | 0.828 | deleterious | None | None | None | None | I |
D/S | 0.2431 | likely_benign | 0.1933 | benign | -1.133 | Destabilizing | 0.983 | D | 0.644 | neutral | None | None | None | None | I |
D/T | 0.581 | likely_pathogenic | 0.4732 | ambiguous | -0.822 | Destabilizing | 0.995 | D | 0.712 | prob.delet. | None | None | None | None | I |
D/V | 0.6121 | likely_pathogenic | 0.4656 | ambiguous | -0.055 | Destabilizing | 0.997 | D | 0.821 | deleterious | None | None | None | None | I |
D/W | 0.9906 | likely_pathogenic | 0.9822 | pathogenic | -0.021 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
D/Y | 0.6603 | likely_pathogenic | 0.5453 | ambiguous | 0.014 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.